| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is eamA [H]
Identifier: 116690584
GI number: 116690584
Start: 2839602
End: 2840480
Strand: Reverse
Name: eamA [H]
Synonym: Bcen2424_2564
Alternate gene names: 116690584
Gene position: 2840480-2839602 (Counterclockwise)
Preceding gene: 116690587
Following gene: 116690581
Centisome position: 81.53
GC content: 69.06
Gene sequence:
>879_bases ATGGCCCCGAAGGACTTGCTGCTCGCGCTGGTCGTGATCCTCGCGTGGGGCGTGAACTTCGTCGTGATCAAGGTCGGCCT GCACGGCATGCCGCCGATGCTGCTCGGCGCGCTGCGCTTCACGCTCGCGGCCGTGCCCGCGGTGTTCTTCGTGCGCCGGC CGCAGATTTCGTGGCGGCTGCTGGTGCTGTACGGCGCGACGATCCAGCTCGGCCAGTTCGTGTTCCTGTTCACCGGCATG TACGTCGGCATGCCGGCCGGCCTCGCATCGCTCGTGCTGCAGTCGCAGGCGTTCTTCACGCTGGTGTTCGCGATGCTGTT CCTCGGCGAGCGGCTGCGCGTGCAGAACCTGGTCGGGCTCGCGATTGCCGCGGGCGGGCTCGTCGTGATCGCCGCGCAGG GCGGCCGCGCGATGACGCTCGCGGGCTTCCTGCTGACGATCTGCTCGGCCGCGATGTGGGCCGTCGGCAATATCGTCACG AAGAAGGTCGGCAAGGCGAACCTCGTGTCGCTCGTCGTGTGGGCGAGCCTTGTGCCGCCCGTGCCGTTCTTCCTGCTGTC GCTGTGGTTCGAAGGGCCGCAGCGGATCGCGACCGCGCTCGCCGGGCTCGACGGCGCATCGATCTTCGCGGTCGTTTATC TCGCGTTCGTCGCGACGCTGCTCGGCTACGGGCTGTGGAGCCGCCTGCTGTCGCGCTACCCGGCCGCGCAGGTCGCGCAA TTCTCCCTGCTGGTGCCGATCATCGGGCTCGCGTCGTCGGCGCTGCTGCTCGACGAGCATCTGACGCAGGCGCAGTTGAT CGGCGCCGCGCTCGTGATGGGCGGGCTCGCGGTGAACGTGTTCGGCGGGAAACTGCTGAGCCGCTTCGCGGCGTCGTGA
Upstream 100 bases:
>100_bases CCGATTCCATACGCGCCGCGCGGGTATCGGGCCGGGCGGCGAAACCCGGTAGACTGACCGGCTTCATACCGACAATTCGA CAATCGAGGAGACGCCGATG
Downstream 100 bases:
>100_bases CGCGCCGGCACGCACTGCGTGCCGGCGGGGGGAAGCGGTGGCGCTCAGGCCATCCGGCTCTTCGCGAGCGGCGGATTCGC GGCGAAATAGCGCTTGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRLLVLYGATIQLGQFVFLFTGM YVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGLAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIVT KKVGKANLVSLVVWASLVPPVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVAQ FSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS
Sequences:
>Translated_292_residues MAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRLLVLYGATIQLGQFVFLFTGM YVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGLAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIVT KKVGKANLVSLVVWASLVPPVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVAQ FSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS >Mature_291_residues APKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRLLVLYGATIQLGQFVFLFTGMY VGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGLAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIVTK KVGKANLVSLVVWASLVPPVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVAQF SLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=288, Percent_Identity=50.6944444444444, Blast_Score=266, Evalue=9e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30856; Mature: 30725
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRL CCHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LVLYGATIQLGQFVFLFTGMYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGL EEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIVTKKVGKANLVSLVVWASLVPP HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC VPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVAQ HHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure APKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRL CHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LVLYGATIQLGQFVFLFTGMYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGL EEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIVTKKVGKANLVSLVVWASLVPP HHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC VPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVAQ HHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]