| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690513
Identifier: 116690513
GI number: 116690513
Start: 2763133
End: 2763804
Strand: Reverse
Name: 116690513
Synonym: Bcen2424_2493
Alternate gene names: NA
Gene position: 2763804-2763133 (Counterclockwise)
Preceding gene: 116690514
Following gene: 116690509
Centisome position: 79.33
GC content: 68.3
Gene sequence:
>672_bases ATGAGTCTGGACTACGGTTTCGTGAAGGCGAAGGTGACGTCGGTGGCGAGGCTGAAGGGCTCGCCGCACGGCCGCGAGAT CCAGTATCACGTTCACCTGACGCTGGCGTTGCCGGCGGGCGACTGGGACGTCGCGATCAACGTCGGCACCAGCGACGCGG ACGATTTGCTGAACTACAAGCTCGTCTACGATTTCCACCATCCGGTCACGGCGACGCTCGCCGCCGCGGCCGAGGGCTAT ACCGATCTGACGGGGCAGGCCGCGCTGCCCGCGCTCGACTACCTGCGCAGCGACATCCTGAACGAGACGGGCGCGTGGCG CGCGAGCGCGGTGATGGACGGCACCGAGCATCCGGAGCCGATCCCGTCGCTGCTGCGGCTCGTGAACGCCGCGCAGTCGC AGGGCCTCGACGTCGTCGTGTTCGGCCGCACCTATGCGCAAGGCAATGGCATCCACGACACGCACATGAACCAGGGCTCG ACGGGCCCGAACTACCTGCATCGCGCGGGTGACGACCACAACGACCACAACGACGTCTGGCAGGACGGCGCGCTGCTCGT GCGCGTGAGCGACACGCAATGGGCCGCGTATTTCGCGGCGTTCGAGCAGCAGGCCGTGCCGACCGACGCGCTCGGCAATC CGCTGCCGGGCGCGGGGCCGATCACGCGCTGA
Upstream 100 bases:
>100_bases CACTCCATTCGACTGTCGGGTCGTGCACGCGGCCGGCCGTCGGCAAACCGACACACGGGCCGCGTAGCATCGATGACCCA TCGGGACACGGAGAACGCGC
Downstream 100 bases:
>100_bases GCCGCTACTGCTACGAGCGGCCGTGTTACGCGGCCGACAGCGTCTTGCCGAACGAGATGCGTTCCTCGACGCGATAGCCG AGCGCGGCATAGAAGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSLDYGFVKAKVTSVARLKGSPHGREIQYHVHLTLALPAGDWDVAINVGTSDADDLLNYKLVYDFHHPVTATLAAAAEGY TDLTGQAALPALDYLRSDILNETGAWRASAVMDGTEHPEPIPSLLRLVNAAQSQGLDVVVFGRTYAQGNGIHDTHMNQGS TGPNYLHRAGDDHNDHNDVWQDGALLVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR
Sequences:
>Translated_223_residues MSLDYGFVKAKVTSVARLKGSPHGREIQYHVHLTLALPAGDWDVAINVGTSDADDLLNYKLVYDFHHPVTATLAAAAEGY TDLTGQAALPALDYLRSDILNETGAWRASAVMDGTEHPEPIPSLLRLVNAAQSQGLDVVVFGRTYAQGNGIHDTHMNQGS TGPNYLHRAGDDHNDHNDVWQDGALLVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR >Mature_222_residues SLDYGFVKAKVTSVARLKGSPHGREIQYHVHLTLALPAGDWDVAINVGTSDADDLLNYKLVYDFHHPVTATLAAAAEGYT DLTGQAALPALDYLRSDILNETGAWRASAVMDGTEHPEPIPSLLRLVNAAQSQGLDVVVFGRTYAQGNGIHDTHMNQGST GPNYLHRAGDDHNDHNDVWQDGALLVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR
Specific function: Unknown
COG id: COG5634
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24009; Mature: 23878
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDYGFVKAKVTSVARLKGSPHGREIQYHVHLTLALPAGDWDVAINVGTSDADDLLNYK CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCHHHHHEEE LVYDFHHPVTATLAAAAEGYTDLTGQAALPALDYLRSDILNETGAWRASAVMDGTEHPEP EEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHEECCCCCCCCH IPSLLRLVNAAQSQGLDVVVFGRTYAQGNGIHDTHMNQGSTGPNYLHRAGDDHNDHNDVW HHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC QDGALLVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR CCCEEEEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure SLDYGFVKAKVTSVARLKGSPHGREIQYHVHLTLALPAGDWDVAINVGTSDADDLLNYK CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCHHHHHEEE LVYDFHHPVTATLAAAAEGYTDLTGQAALPALDYLRSDILNETGAWRASAVMDGTEHPEP EEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHEECCCCCCCCH IPSLLRLVNAAQSQGLDVVVFGRTYAQGNGIHDTHMNQGSTGPNYLHRAGDDHNDHNDVW HHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC QDGALLVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR CCCEEEEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA