Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690509

Identifier: 116690509

GI number: 116690509

Start: 2758985

End: 2760022

Strand: Reverse

Name: 116690509

Synonym: Bcen2424_2489

Alternate gene names: NA

Gene position: 2760022-2758985 (Counterclockwise)

Preceding gene: 116690513

Following gene: 116690506

Centisome position: 79.22

GC content: 73.8

Gene sequence:

>1038_bases
ATGATCGCGACACGAATCCTGCGCCGGCCGCGCGTACTGATCGTCGGCTGCGGCGACGTCGGCATGCGCTGCGTCGCGCA
ATGGCGTAACGCGCGCCCCGACCTGCGTATCCTCGCGCTGACGAGCCATCCGGCTCGCCGCGACGAACTGCGCGCCGCGG
GCGCGACGCCGATCGTCGGCGACCTCGATCGCCGGGCGGCGCTCGGCCGTCTCGCGGGCCTCGCCCGCACGATCCTGCAT
CTCGCGCCGCCGCCATCCGACGGCCGTGACGACCGGCGCACGCGTGCGCTGATCGCCGCAACGTCCATGCCCGCGCGTCG
GCCGGCGGCACCGCCGGCCCCGGCGGTCGGCCGGCTCCGAACGCTGCGCACCGCGGCGCGACAGGCCGGCGCGCCCGTTC
GGGCAGCGCGTATTGTACCCGAGGGCCTTCGCGCGCCGACGCTCGTCTATGCCAGTACGACGGGCGTCTACGGCGACTGC
GGCGGCGCGCGCATCGACGAAACGCACCCGCTGCGCCCCGCGAATCCGCGCGCGTTCCGGCGCGTGTCGGCCGAGCGGCA
ACTGCGTGCGGCGACGGTGCGCGGCGTGCTGTCCGCACGCATCGTGCGCATCCCCGGCATCTACGCGGCGAACCGCCTGC
CGGTCGCGCGGCTCGAGCGCGGCACGCCGGCGCTCGAGCCGGCCGACGACGTCTACACGAACCACATCCATGCGGACGAT
CTCGCGGCGATCCTGCGCCGGGCGGCCGAGCAGGGCAAGCCGGCGCGCGTCGTGCACGCGTCGGACGACACCGAATGGCG
GATGGGAGAGTATTTCGACCGGGTCGCGCAGGTGCTCGGCCTGCCGAAGCCGCCGCGCGTGAGCCGCGCGGACGCCGAGC
GCCTGCTCGAGCCGACGCTGCTGTCGTTCATGCGCGAGTCGCGGCGCCTGTCCAACACACGGCTCAAGGCCGAATTGTGC
GTGACGTTGCGCTATCCGACCGTAGACGATTTCCTTCAAACGCTCGCGCCGGCCAGCGCGTCAGGTGAGCGCCGGTAA

Upstream 100 bases:

>100_bases
AACTAGAACAAAATGGGGGGACCGTGCATGTCGCGCACGGCAGCTACAATGCAAAGCCGTTGCGCGTCGCGCAACGGCGG
CTACTGATTTCGCAACCAAC

Downstream 100 bases:

>100_bases
CGCCTCGATCAGCAGGAAGCACAGCAGCGCACCGATCAGCGCGCCGATCAGGTTCGGATGATATTTGTGCTTCAGATGCA
TCGTGGCCAGCAGGCCTCCG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; NAD Dependent Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; Actc Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; Sugar Epimerase/Dehydratase-Like Protein

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MIATRILRRPRVLIVGCGDVGMRCVAQWRNARPDLRILALTSHPARRDELRAAGATPIVGDLDRRAALGRLAGLARTILH
LAPPPSDGRDDRRTRALIAATSMPARRPAAPPAPAVGRLRTLRTAARQAGAPVRAARIVPEGLRAPTLVYASTTGVYGDC
GGARIDETHPLRPANPRAFRRVSAERQLRAATVRGVLSARIVRIPGIYAANRLPVARLERGTPALEPADDVYTNHIHADD
LAAILRRAAEQGKPARVVHASDDTEWRMGEYFDRVAQVLGLPKPPRVSRADAERLLEPTLLSFMRESRRLSNTRLKAELC
VTLRYPTVDDFLQTLAPASASGERR

Sequences:

>Translated_345_residues
MIATRILRRPRVLIVGCGDVGMRCVAQWRNARPDLRILALTSHPARRDELRAAGATPIVGDLDRRAALGRLAGLARTILH
LAPPPSDGRDDRRTRALIAATSMPARRPAAPPAPAVGRLRTLRTAARQAGAPVRAARIVPEGLRAPTLVYASTTGVYGDC
GGARIDETHPLRPANPRAFRRVSAERQLRAATVRGVLSARIVRIPGIYAANRLPVARLERGTPALEPADDVYTNHIHADD
LAAILRRAAEQGKPARVVHASDDTEWRMGEYFDRVAQVLGLPKPPRVSRADAERLLEPTLLSFMRESRRLSNTRLKAELC
VTLRYPTVDDFLQTLAPASASGERR
>Mature_345_residues
MIATRILRRPRVLIVGCGDVGMRCVAQWRNARPDLRILALTSHPARRDELRAAGATPIVGDLDRRAALGRLAGLARTILH
LAPPPSDGRDDRRTRALIAATSMPARRPAAPPAPAVGRLRTLRTAARQAGAPVRAARIVPEGLRAPTLVYASTTGVYGDC
GGARIDETHPLRPANPRAFRRVSAERQLRAATVRGVLSARIVRIPGIYAANRLPVARLERGTPALEPADDVYTNHIHADD
LAAILRRAAEQGKPARVVHASDDTEWRMGEYFDRVAQVLGLPKPPRVSRADAERLLEPTLLSFMRESRRLSNTRLKAELC
VTLRYPTVDDFLQTLAPASASGERR

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37717; Mature: 37717

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATRILRRPRVLIVGCGDVGMRCVAQWRNARPDLRILALTSHPARRDELRAAGATPIVG
CCCHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC
DLDRRAALGRLAGLARTILHLAPPPSDGRDDRRTRALIAATSMPARRPAAPPAPAVGRLR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCHHHHHH
TLRTAARQAGAPVRAARIVPEGLRAPTLVYASTTGVYGDCGGARIDETHPLRPANPRAFR
HHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
RVSAERQLRAATVRGVLSARIVRIPGIYAANRLPVARLERGTPALEPADDVYTNHIHADD
HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHH
LAAILRRAAEQGKPARVVHASDDTEWRMGEYFDRVAQVLGLPKPPRVSRADAERLLEPTL
HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LSFMRESRRLSNTRLKAELCVTLRYPTVDDFLQTLAPASASGERR
HHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIATRILRRPRVLIVGCGDVGMRCVAQWRNARPDLRILALTSHPARRDELRAAGATPIVG
CCCHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC
DLDRRAALGRLAGLARTILHLAPPPSDGRDDRRTRALIAATSMPARRPAAPPAPAVGRLR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCHHHHHH
TLRTAARQAGAPVRAARIVPEGLRAPTLVYASTTGVYGDCGGARIDETHPLRPANPRAFR
HHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
RVSAERQLRAATVRGVLSARIVRIPGIYAANRLPVARLERGTPALEPADDVYTNHIHADD
HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHH
LAAILRRAAEQGKPARVVHASDDTEWRMGEYFDRVAQVLGLPKPPRVSRADAERLLEPTL
HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LSFMRESRRLSNTRLKAELCVTLRYPTVDDFLQTLAPASASGERR
HHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA