| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690501
Identifier: 116690501
GI number: 116690501
Start: 2752906
End: 2753796
Strand: Reverse
Name: 116690501
Synonym: Bcen2424_2481
Alternate gene names: NA
Gene position: 2753796-2752906 (Counterclockwise)
Preceding gene: 116690503
Following gene: 116690498
Centisome position: 79.04
GC content: 71.38
Gene sequence:
>891_bases ATGACGACCTATGCGCATGCGACGACCGCGTCGCTCGACATTGCCTATCTCGAATGGAATCCGCGCGGCGAACGCGTGGC CGTGCTGCTGCACGGCTGGCCGGACAGCCCGGTCGGCTGGGAGGCGGTGGCATCGGCGCTCGCCGCACGCGGCTACCGCG TGCTCGCCCCTGCGTTGCGCGGCTTCGCGCCGACGCGCTTTCGTGACGCGTCCGTGCCGCGCAGCGGCCAGCTCGCCGCG CTCGGGCGCGACCTGCTCGAATTCGTCGATGTGCTCGGTATCGAGCGGCCCGTGCTGGTCGGACACGACTGGGGCGCCCG CGCGGCCGCGAACGCATGCGGGCTACGCGACGGTGTTGCCTCGCAGCTCGTGATGCTGTCGGTCGGCTACGGCACCAACG ATCCCGCCCAGCCGCTGTCGCTGCAGCAGGCGCGCAACTACTGGTATCACTGGTTCATGGCGACGCCGCGCGGCGAGCAG GCGCTGCGCGACGACCGCCGCGCGTTCGCGCGCCTGATGTGGGATACGTGGTCGCCGCCGGGCTGGTATCGCGACAGCGA TTTCGACGCGGCGGCCGCCGCGTTCGACGGACCCGACTGGATCGACGTCGTGCTGCATTCGTACCGGCAGCGCTGGGGCT TCGCGCCAGGCACGCCGGCTTATGCCGACGACGACGCGCGGCTGAACCCGGCGCCCGTGCTGACGGTACCGACGCTCGTG CTGCACGGCGGCGCGGACACCTGCAATCATCCGGACAGCTCGGTCGGGCGCGAGCGGTTCTTCGCCGGGCGCTACGAGCG GCAGGTGCTCGACGGCATCGGGCACTTCCCGCAGCGCGAATCCGCGACGGCGGTCGCTGACGCGATTCTCGGCTTCTGCG AGCGGGATTGA
Upstream 100 bases:
>100_bases ATTCAACGCAAGAATTGAAGAATGAATCATGATACTCCGTGAATTGTGATGAAAGACCGACCTACCATCGTAGGTTCACG GTGACTTCACGGAGTACACG
Downstream 100 bases:
>100_bases CGCGCGCCGGCCGGCCCGGCGCGCGAAGAAATCAGCCGTCGACACGCGGCGCGAGCAGATCGGCGAGCCCGATGTTCCGG AACATCTCGCGGCGGATGCG
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Epoxide Hydrolase Protein; Epoxide Hydrolase; Alpha/Beta Hydrolase; Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family; Epoxide Hydrolase EphC; Dehalogenase/Hydrolase; S33 Family Peptidase; Alpha/Beta Hydrolase Superfamily Protein; Epoxide Hydrolase EphB; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Or Acyltransferase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTTYAHATTASLDIAYLEWNPRGERVAVLLHGWPDSPVGWEAVASALAARGYRVLAPALRGFAPTRFRDASVPRSGQLAA LGRDLLEFVDVLGIERPVLVGHDWGARAAANACGLRDGVASQLVMLSVGYGTNDPAQPLSLQQARNYWYHWFMATPRGEQ ALRDDRRAFARLMWDTWSPPGWYRDSDFDAAAAAFDGPDWIDVVLHSYRQRWGFAPGTPAYADDDARLNPAPVLTVPTLV LHGGADTCNHPDSSVGRERFFAGRYERQVLDGIGHFPQRESATAVADAILGFCERD
Sequences:
>Translated_296_residues MTTYAHATTASLDIAYLEWNPRGERVAVLLHGWPDSPVGWEAVASALAARGYRVLAPALRGFAPTRFRDASVPRSGQLAA LGRDLLEFVDVLGIERPVLVGHDWGARAAANACGLRDGVASQLVMLSVGYGTNDPAQPLSLQQARNYWYHWFMATPRGEQ ALRDDRRAFARLMWDTWSPPGWYRDSDFDAAAAAFDGPDWIDVVLHSYRQRWGFAPGTPAYADDDARLNPAPVLTVPTLV LHGGADTCNHPDSSVGRERFFAGRYERQVLDGIGHFPQRESATAVADAILGFCERD >Mature_295_residues TTYAHATTASLDIAYLEWNPRGERVAVLLHGWPDSPVGWEAVASALAARGYRVLAPALRGFAPTRFRDASVPRSGQLAAL GRDLLEFVDVLGIERPVLVGHDWGARAAANACGLRDGVASQLVMLSVGYGTNDPAQPLSLQQARNYWYHWFMATPRGEQA LRDDRRAFARLMWDTWSPPGWYRDSDFDAAAAAFDGPDWIDVVLHSYRQRWGFAPGTPAYADDDARLNPAPVLTVPTLVL HGGADTCNHPDSSVGRERFFAGRYERQVLDGIGHFPQRESATAVADAILGFCERD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32565; Mature: 32433
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYAHATTASLDIAYLEWNPRGERVAVLLHGWPDSPVGWEAVASALAARGYRVLAPALR CCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHH GFAPTRFRDASVPRSGQLAALGRDLLEFVDVLGIERPVLVGHDWGARAAANACGLRDGVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCHHHHH SQLVMLSVGYGTNDPAQPLSLQQARNYWYHWFMATPRGEQALRDDRRAFARLMWDTWSPP HHEEEEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC GWYRDSDFDAAAAAFDGPDWIDVVLHSYRQRWGFAPGTPAYADDDARLNPAPVLTVPTLV CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCEE LHGGADTCNHPDSSVGRERFFAGRYERQVLDGIGHFPQRESATAVADAILGFCERD EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TTYAHATTASLDIAYLEWNPRGERVAVLLHGWPDSPVGWEAVASALAARGYRVLAPALR CCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHH GFAPTRFRDASVPRSGQLAALGRDLLEFVDVLGIERPVLVGHDWGARAAANACGLRDGVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCHHHHH SQLVMLSVGYGTNDPAQPLSLQQARNYWYHWFMATPRGEQALRDDRRAFARLMWDTWSPP HHEEEEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC GWYRDSDFDAAAAAFDGPDWIDVVLHSYRQRWGFAPGTPAYADDDARLNPAPVLTVPTLV CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCEE LHGGADTCNHPDSSVGRERFFAGRYERQVLDGIGHFPQRESATAVADAILGFCERD EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA