Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690494

Identifier: 116690494

GI number: 116690494

Start: 2744977

End: 2745516

Strand: Reverse

Name: 116690494

Synonym: Bcen2424_2474

Alternate gene names: NA

Gene position: 2745516-2744977 (Counterclockwise)

Preceding gene: 116690495

Following gene: 116690493

Centisome position: 78.81

GC content: 69.26

Gene sequence:

>540_bases
ATGGCTTCGATTATCAAGAACCGCGCAGTGATCGACGACGCATGGCAGGTCGTACGCGCGGCGGAAGACGGTACGCTGCC
CGCGGTCGACGCATTGCCGGCCGGCAAGGTGCTGGTGCCGTTCGCGTTGTGGCAGGCCGGGCGCGCGGCGCTCGTCGCCG
CGAAGACGAAGGACGAACTCGGCGTGTGGCTCGCGCCGGACAGCGAACCGGCCAATCTCGTGGCCGACTTCGGCGCGATC
TCGCTGATCGCCGTCGACTTCCCGCGCTTCGCGGACGGCCGCGGCTACAGCATCGCGCGCCTGCTGCGCGAGCGTCATGG
CTGGACCGGCGAGCTGCGCGCGATCGGCGACGTGCTGCGCGACCAGTTGCTGTACATGTCGCGTTGCGGCTTCGACGCGT
TCGCGGTGCGTGCCGACAAGGACATCCACGACGCGCTGAATGCGTTCACGGAATTCACGCAGCGTTACCAGGGCGCGTTC
GACGAGCCGGCGCCGCTGTTCCGCCGCCGCGAGGCGGCTGCCGCCAAGGTGAGCGCATGA

Upstream 100 bases:

>100_bases
GACACGTATGATCGCATCGGCATCGCGCCGTTCAAGGAGCGCGTGTATGCGGCGCGCCAGGCAGTGAACGCGTAATCAAC
CGGGTAGAGGGAATTTGCAG

Downstream 100 bases:

>100_bases
GCACCGCGACCGCCCCCGCGCTGACGCCGGAACTCGCCGCCAAGGTCGAGCGCCTCGACGCGCTGCTCGCGCAGATCGGC
GAGCGTCACGACAAGGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDELGVWLAPDSEPANLVADFGAI
SLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAF
DEPAPLFRRREAAAAKVSA

Sequences:

>Translated_179_residues
MASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDELGVWLAPDSEPANLVADFGAI
SLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAF
DEPAPLFRRREAAAAKVSA
>Mature_178_residues
ASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDELGVWLAPDSEPANLVADFGAIS
LIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAFD
EPAPLFRRREAAAAKVSA

Specific function: Unknown

COG id: COG3749

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19513; Mature: 19382

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDEL
CCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC
GVWLAPDSEPANLVADFGAISLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLR
EEEECCCCCCHHHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
DQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAFDEPAPLFRRREAAAAKVSA
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDEL
CCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC
GVWLAPDSEPANLVADFGAISLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLR
EEEECCCCCCHHHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
DQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAFDEPAPLFRRREAAAAKVSA
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA