| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690494
Identifier: 116690494
GI number: 116690494
Start: 2744977
End: 2745516
Strand: Reverse
Name: 116690494
Synonym: Bcen2424_2474
Alternate gene names: NA
Gene position: 2745516-2744977 (Counterclockwise)
Preceding gene: 116690495
Following gene: 116690493
Centisome position: 78.81
GC content: 69.26
Gene sequence:
>540_bases ATGGCTTCGATTATCAAGAACCGCGCAGTGATCGACGACGCATGGCAGGTCGTACGCGCGGCGGAAGACGGTACGCTGCC CGCGGTCGACGCATTGCCGGCCGGCAAGGTGCTGGTGCCGTTCGCGTTGTGGCAGGCCGGGCGCGCGGCGCTCGTCGCCG CGAAGACGAAGGACGAACTCGGCGTGTGGCTCGCGCCGGACAGCGAACCGGCCAATCTCGTGGCCGACTTCGGCGCGATC TCGCTGATCGCCGTCGACTTCCCGCGCTTCGCGGACGGCCGCGGCTACAGCATCGCGCGCCTGCTGCGCGAGCGTCATGG CTGGACCGGCGAGCTGCGCGCGATCGGCGACGTGCTGCGCGACCAGTTGCTGTACATGTCGCGTTGCGGCTTCGACGCGT TCGCGGTGCGTGCCGACAAGGACATCCACGACGCGCTGAATGCGTTCACGGAATTCACGCAGCGTTACCAGGGCGCGTTC GACGAGCCGGCGCCGCTGTTCCGCCGCCGCGAGGCGGCTGCCGCCAAGGTGAGCGCATGA
Upstream 100 bases:
>100_bases GACACGTATGATCGCATCGGCATCGCGCCGTTCAAGGAGCGCGTGTATGCGGCGCGCCAGGCAGTGAACGCGTAATCAAC CGGGTAGAGGGAATTTGCAG
Downstream 100 bases:
>100_bases GCACCGCGACCGCCCCCGCGCTGACGCCGGAACTCGCCGCCAAGGTCGAGCGCCTCGACGCGCTGCTCGCGCAGATCGGC GAGCGTCACGACAAGGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDELGVWLAPDSEPANLVADFGAI SLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAF DEPAPLFRRREAAAAKVSA
Sequences:
>Translated_179_residues MASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDELGVWLAPDSEPANLVADFGAI SLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAF DEPAPLFRRREAAAAKVSA >Mature_178_residues ASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDELGVWLAPDSEPANLVADFGAIS LIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLRDQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAFD EPAPLFRRREAAAAKVSA
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19513; Mature: 19382
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDEL CCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC GVWLAPDSEPANLVADFGAISLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLR EEEECCCCCCHHHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH DQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAFDEPAPLFRRREAAAAKVSA HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ASIIKNRAVIDDAWQVVRAAEDGTLPAVDALPAGKVLVPFALWQAGRAALVAAKTKDEL CCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC GVWLAPDSEPANLVADFGAISLIAVDFPRFADGRGYSIARLLRERHGWTGELRAIGDVLR EEEECCCCCCHHHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH DQLLYMSRCGFDAFAVRADKDIHDALNAFTEFTQRYQGAFDEPAPLFRRREAAAAKVSA HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA