Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690484

Identifier: 116690484

GI number: 116690484

Start: 2735437

End: 2736192

Strand: Reverse

Name: 116690484

Synonym: Bcen2424_2464

Alternate gene names: NA

Gene position: 2736192-2735437 (Counterclockwise)

Preceding gene: 116690485

Following gene: 116690481

Centisome position: 78.54

GC content: 71.96

Gene sequence:

>756_bases
GTGACAGAAGCCGATTCATCCTCGATCCCGACACTGACCGACGTGCTGGTGCCGGGCAAGCCGGCGTCGGCGCGTTCGTC
CGCGTCCGCCGCGCCCCAACCGCACGACAGCGCGGCCATTCCGGTGCTAACCGACGTGATCGCCCCGGGCGCCGCCGGTG
CGGCGCCGGCTGATTTCCGTCAAACCGAAGCCGACCCCGAATCCGTCGTGGTCGAGCCCATCCCCACGCCGCACGTGCCG
GCCGTCGAGTTGCCCGGCGACGCGGCGACGGCCGCCGCCGCAGGCGAGACCGATGCACCGGCCGAACCCGGCGCCGCGGA
GCACGTGGTCGCAGAAGACGCGGCAGCGATGACGGCGCCGCTGCGCTCGTCGCTGGTCGATGACGACCTGCCGCCGCACA
CGTTCGCCGCGATTGCGCCCGAAGCGGTTGCGCACGCGCCCGGCACGGCGATGCCGCAGGCGGACCTGCCGAGTGCAGCG
CCGCAGCCGGACGCGCAGGCCGCAGCGGGGCTGACGCCGGAAGATGCGCAGCACATCGCCGAACGGCTGCGCAATCGGCT
GACGAATTATCTGACCGGTGCGGGGCGCGACGCCATCGAAGCGCGCTGTCGCGATGCGCTGCACGAGCATTCGGCCTGGC
TGGTCGGCCAGATCACGCGCGAAGTCGCCCTCGCGCTGGAAACCGAGGTGATGGACTGGGTGCGCGATGCGGTCGATGAA
GAGATCGCCCGCCGTCGCGTCGGTCATTCCGGCTGA

Upstream 100 bases:

>100_bases
GCCGCGGGCCGCGACCGCTACCGGTTCTACCGCGACCGCGGTTACGCGCTGAACAACTACAAGCAGGGCGGCTAGCCGCA
ACCGTCGACGGAGTGTTCCC

Downstream 100 bases:

>100_bases
ACGGCCGATCTTTCGCGCTGGCGAAAAAGAGGGGGCGGGTCCGGTAAGGGCTTGCGAAGGCGCCGCAGAGGTGTGGCGCG
GCCAGTACCAGGCCGCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTEADSSSIPTLTDVLVPGKPASARSSASAAPQPHDSAAIPVLTDVIAPGAAGAAPADFRQTEADPESVVVEPIPTPHVP
AVELPGDAATAAAAGETDAPAEPGAAEHVVAEDAAAMTAPLRSSLVDDDLPPHTFAAIAPEAVAHAPGTAMPQADLPSAA
PQPDAQAAAGLTPEDAQHIAERLRNRLTNYLTGAGRDAIEARCRDALHEHSAWLVGQITREVALALETEVMDWVRDAVDE
EIARRRVGHSG

Sequences:

>Translated_251_residues
MTEADSSSIPTLTDVLVPGKPASARSSASAAPQPHDSAAIPVLTDVIAPGAAGAAPADFRQTEADPESVVVEPIPTPHVP
AVELPGDAATAAAAGETDAPAEPGAAEHVVAEDAAAMTAPLRSSLVDDDLPPHTFAAIAPEAVAHAPGTAMPQADLPSAA
PQPDAQAAAGLTPEDAQHIAERLRNRLTNYLTGAGRDAIEARCRDALHEHSAWLVGQITREVALALETEVMDWVRDAVDE
EIARRRVGHSG
>Mature_250_residues
TEADSSSIPTLTDVLVPGKPASARSSASAAPQPHDSAAIPVLTDVIAPGAAGAAPADFRQTEADPESVVVEPIPTPHVPA
VELPGDAATAAAAGETDAPAEPGAAEHVVAEDAAAMTAPLRSSLVDDDLPPHTFAAIAPEAVAHAPGTAMPQADLPSAAP
QPDAQAAAGLTPEDAQHIAERLRNRLTNYLTGAGRDAIEARCRDALHEHSAWLVGQITREVALALETEVMDWVRDAVDEE
IARRRVGHSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25701; Mature: 25570

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEADSSSIPTLTDVLVPGKPASARSSASAAPQPHDSAAIPVLTDVIAPGAAGAAPADFR
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHH
QTEADPESVVVEPIPTPHVPAVELPGDAATAAAAGETDAPAEPGAAEHVVAEDAAAMTAP
HCCCCCCCEEECCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LRSSLVDDDLPPHTFAAIAPEAVAHAPGTAMPQADLPSAAPQPDAQAAAGLTPEDAQHIA
HHHHHHCCCCCCHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
ERLRNRLTNYLTGAGRDAIEARCRDALHEHSAWLVGQITREVALALETEVMDWVRDAVDE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIARRRVGHSG
HHHHHHCCCCC
>Mature Secondary Structure 
TEADSSSIPTLTDVLVPGKPASARSSASAAPQPHDSAAIPVLTDVIAPGAAGAAPADFR
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHH
QTEADPESVVVEPIPTPHVPAVELPGDAATAAAAGETDAPAEPGAAEHVVAEDAAAMTAP
HCCCCCCCEEECCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LRSSLVDDDLPPHTFAAIAPEAVAHAPGTAMPQADLPSAAPQPDAQAAAGLTPEDAQHIA
HHHHHHCCCCCCHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
ERLRNRLTNYLTGAGRDAIEARCRDALHEHSAWLVGQITREVALALETEVMDWVRDAVDE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIARRRVGHSG
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA