| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yfbT [C]
Identifier: 116690450
GI number: 116690450
Start: 2698174
End: 2698866
Strand: Direct
Name: yfbT [C]
Synonym: Bcen2424_2430
Alternate gene names: 116690450
Gene position: 2698174-2698866 (Clockwise)
Preceding gene: 116690449
Following gene: 116690456
Centisome position: 77.45
GC content: 71.57
Gene sequence:
>693_bases ATGCCCCCGATGACCTTTTCCGCCGCGCTCTTCGACATGGACGGCCTGCTCGTCGATTCCGAGCGGACCATCATGAACAC GTGGATCGACGTGTCGAATGCGCACGGCGTCGTGCTGACCGAGATCGATTACCTGCAGATCGTCGGCCGGTCGTTCGCCG AGGGCCAGGTGATCCTGGCGCGGTTGATCGGCGACCCCGATACGTTCGACGCGGTGCGCATCCGCGTGCGCGAGCAACTC GCCGCCCCCGAACCCCATCCGAAGTTTCCGCTGAAGCCGGGCGCGCTCGAGCTGCTCGAAACGCTCGCGCGGGCGGGCAT TCCGTGCGCGGTCGCGTCGTCGTCCGCGGGCGACGTGATCCGCGCGCGGCTCGGCGCGGTCGGCGTGCTGCCGTTCTTCC GTGCGATCGCGGGCGGCGACGAAGTCGCGCGCGGCAAGCCCGACCCGGCCGTCTACCGGCTCGCGGCCGAGCGTCTCGGC GTGCCGGCCCACGCGTGCGTCGCGTTCGAGGACAGCGACTTCGGCGCGCAGTCGGCCGCCAGCGCGGGTGCTGCCGTCGT CACCGTGCCCGACCTGAAGGCGCCGACGCCCGAGATCGTCGCGCTGAGCCTGCACGTGCTCGCGTCGCTCGACGATGCGG TCGCGCTCGTGCCGTCGTGGTTCGGGCTGCAGGGCACGTCGCAGCCCGCGTAG
Upstream 100 bases:
>100_bases GCTGGCCAAGTAACGGCCTGCGGTTCCGGACGGACGCCTTCGGCGTCCGTTTTTCATTCGGGCGGCCCTCGCGCCGCCCG CTGCTTTCCCCGCTTCACGG
Downstream 100 bases:
>100_bases GCCCGCGTAGGCAATACGCCGCGCCATGCAAAACGGGCACCCGAGGGTGCCCGTTTCGTCGTGTCGCCCACTCGAAAGCG GCGCGTCCTTTACCGGTTGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPPMTFSAALFDMDGLLVDSERTIMNTWIDVSNAHGVVLTEIDYLQIVGRSFAEGQVILARLIGDPDTFDAVRIRVREQL AAPEPHPKFPLKPGALELLETLARAGIPCAVASSSAGDVIRARLGAVGVLPFFRAIAGGDEVARGKPDPAVYRLAAERLG VPAHACVAFEDSDFGAQSAASAGAAVVTVPDLKAPTPEIVALSLHVLASLDDAVALVPSWFGLQGTSQPA
Sequences:
>Translated_230_residues MPPMTFSAALFDMDGLLVDSERTIMNTWIDVSNAHGVVLTEIDYLQIVGRSFAEGQVILARLIGDPDTFDAVRIRVREQL AAPEPHPKFPLKPGALELLETLARAGIPCAVASSSAGDVIRARLGAVGVLPFFRAIAGGDEVARGKPDPAVYRLAAERLG VPAHACVAFEDSDFGAQSAASAGAAVVTVPDLKAPTPEIVALSLHVLASLDDAVALVPSWFGLQGTSQPA >Mature_229_residues PPMTFSAALFDMDGLLVDSERTIMNTWIDVSNAHGVVLTEIDYLQIVGRSFAEGQVILARLIGDPDTFDAVRIRVREQLA APEPHPKFPLKPGALELLETLARAGIPCAVASSSAGDVIRARLGAVGVLPFFRAIAGGDEVARGKPDPAVYRLAAERLGV PAHACVAFEDSDFGAQSAASAGAAVVTVPDLKAPTPEIVALSLHVLASLDDAVALVPSWFGLQGTSQPA
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=229, Percent_Identity=31.4410480349345, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI207113149, Length=252, Percent_Identity=30.952380952381, Blast_Score=81, Evalue=6e-16, Organism=Escherichia coli, GI87082080, Length=213, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789046, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=2e-14, Organism=Drosophila melanogaster, GI116008157, Length=226, Percent_Identity=31.858407079646, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI17137324, Length=237, Percent_Identity=32.9113924050633, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550911, Length=223, Percent_Identity=29.1479820627803, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI20129151, Length=227, Percent_Identity=28.1938325991189, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24045; Mature: 23914
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPMTFSAALFDMDGLLVDSERTIMNTWIDVSNAHGVVLTEIDYLQIVGRSFAEGQVILA CCCCCHHHHHCCCCCEEECCCCEEEEHEEECCCCCCEEEECHHHHHHHCCCCCCCCEEEE RLIGDPDTFDAVRIRVREQLAAPEPHPKFPLKPGALELLETLARAGIPCAVASSSAGDVI EHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHH RARLGAVGVLPFFRAIAGGDEVARGKPDPAVYRLAAERLGVPAHACVAFEDSDFGAQSAA HHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH SAGAAVVTVPDLKAPTPEIVALSLHVLASLDDAVALVPSWFGLQGTSQPA CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PPMTFSAALFDMDGLLVDSERTIMNTWIDVSNAHGVVLTEIDYLQIVGRSFAEGQVILA CCCCHHHHHCCCCCEEECCCCEEEEHEEECCCCCCEEEECHHHHHHHCCCCCCCCEEEE RLIGDPDTFDAVRIRVREQLAAPEPHPKFPLKPGALELLETLARAGIPCAVASSSAGDVI EHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHH RARLGAVGVLPFFRAIAGGDEVARGKPDPAVYRLAAERLGVPAHACVAFEDSDFGAQSAA HHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH SAGAAVVTVPDLKAPTPEIVALSLHVLASLDDAVALVPSWFGLQGTSQPA CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]