Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is argT [H]

Identifier: 116690424

GI number: 116690424

Start: 2665973

End: 2666755

Strand: Direct

Name: argT [H]

Synonym: Bcen2424_2404

Alternate gene names: 116690424

Gene position: 2665973-2666755 (Clockwise)

Preceding gene: 116690422

Following gene: 116690425

Centisome position: 76.52

GC content: 65.26

Gene sequence:

>783_bases
ATGAAGAAGGCCGCCCTGTGCGCCGCCCTCGCCCTCGTGGCGGGCAGCGCCTTCGCGAAGGAGTGGAAGACCGTGCGGAT
CGGCGTCGATGCCAGCTACCCGCCGTTCGAGTCGACCGCGCCGAGCGGCGAGATCGTCGGTTTCGACGTCGATCTCACCA
AGGAAATCTGCAAGCGGATCAACGTGAAGTGCGTGTGGGTGGCGCAGGATCTCGACGGGATCATCCCGGCGCTGAAGGCG
AAGAAGTACGACGTCATCGTGTCGTCGCTGACCGTGACGGACAAGCGTCGCGAGCAGATCGACTTCTCCGACAAGGTGTA
CGACGCACCCGCGCGGATGATCGCGAAAACCGGCTCGCCGCTGCTGCCGACGGTCGCGTCGCTCAAGGGCAAGCGCGTCG
GCGTCGAGCAGGGCTCCACGCAGGAAACCTACGCGAAGGCGTACTGGGAACCGCAGGGCGTGACGATCGTTCCTTACCAG
AACCAGGACCAGGTCTATGCCGATCTCGGCACGGGCCGCCTCGACGCGACGCTGCAGGATGAACTGCAGGCCGACTACGG
CTTCCTGCGCACGCCGCGCGGCAAGGGCTTCGCGTTCGCCGGGCCGGAAGTGAAGGATCCGAAGACGATCGGCGACGGCA
CCGCGATCGGCCTGCGCAAGGAAGATACCGACCTGAAGCTGAGAATCAACCAGGCGCTGGCCGACATGCACAAGGACGGT
ACGTACGACCGGCTGTCGCACAAGTACTTCTCGTTCAGCGTCTACTCGGCGCCGGCCCGCTGA

Upstream 100 bases:

>100_bases
AGAGCGCCGATCGGCGATTTTTGGCCGTCTAGAATACGCCGCGGCGCCCGGTTCGACCGGCCGCGAGCGCCCCCGGAAAG
TCAGCAACAGAAGGATGGAA

Downstream 100 bases:

>100_bases
ACGTCGACAAGCAGCAGCGGATGCGGGGGCGGCCCCGCGTCCGGGCAGTACAGGCAGTCAACCACGCGCCGCCCGCCCCC
TTGCCCGCCGTTCGCGCGAC

Product: cationic amino acid ABC transporter, periplasmic binding protein

Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: LAO-binding protein [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKKAALCAALALVAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVKCVWVAQDLDGIIPALKA
KKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVGVEQGSTQETYAKAYWEPQGVTIVPYQ
NQDQVYADLGTGRLDATLQDELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLRINQALADMHKDG
TYDRLSHKYFSFSVYSAPAR

Sequences:

>Translated_260_residues
MKKAALCAALALVAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVKCVWVAQDLDGIIPALKA
KKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVGVEQGSTQETYAKAYWEPQGVTIVPYQ
NQDQVYADLGTGRLDATLQDELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLRINQALADMHKDG
TYDRLSHKYFSFSVYSAPAR
>Mature_260_residues
MKKAALCAALALVAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVKCVWVAQDLDGIIPALKA
KKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSPLLPTVASLKGKRVGVEQGSTQETYAKAYWEPQGVTIVPYQ
NQDQVYADLGTGRLDATLQDELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLRINQALADMHKDG
TYDRLSHKYFSFSVYSAPAR

Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788649, Length=258, Percent_Identity=56.2015503875969, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=54.5064377682403, Blast_Score=282, Evalue=1e-77,
Organism=Escherichia coli, GI1787085, Length=250, Percent_Identity=36.4, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=34.8, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1788228, Length=263, Percent_Identity=31.9391634980989, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787031, Length=248, Percent_Identity=32.258064516129, Blast_Score=114, Evalue=7e-27,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28476; Mature: 28476

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAALCAALALVAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI
CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHC
NVKCVWVAQDLDGIIPALKAKKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSP
CCEEEEEECCCHHHHHHHCCCCEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCC
LLPTVASLKGKRVGVEQGSTQETYAKAYWEPQGVTIVPYQNQDQVYADLGTGRLDATLQD
CCHHHHHCCCCEECCCCCCCHHHHHHHEECCCCEEEEEECCCCCEEEECCCCCCCCHHHH
ELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLRINQALADMHKDG
HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHCCC
TYDRLSHKYFSFSVYSAPAR
CHHHHCCEEEEEEEEECCCC
>Mature Secondary Structure
MKKAALCAALALVAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI
CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHC
NVKCVWVAQDLDGIIPALKAKKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSP
CCEEEEEECCCHHHHHHHCCCCEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCC
LLPTVASLKGKRVGVEQGSTQETYAKAYWEPQGVTIVPYQNQDQVYADLGTGRLDATLQD
CCHHHHHCCCCEECCCCCCCHHHHHHHEECCCCEEEEEECCCCCEEEECCCCCCCCHHHH
ELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLRINQALADMHKDG
HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHCCC
TYDRLSHKYFSFSVYSAPAR
CHHHHCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3040734; 9298646 [H]