The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yjgI [H]

Identifier: 116690405

GI number: 116690405

Start: 2649178

End: 2649918

Strand: Reverse

Name: yjgI [H]

Synonym: Bcen2424_2385

Alternate gene names: 116690405

Gene position: 2649918-2649178 (Counterclockwise)

Preceding gene: 116690407

Following gene: 116690403

Centisome position: 76.06

GC content: 68.69

Gene sequence:

>741_bases
ATGAATCGACTTCAGGGCAAGCGTGCACTCATCACGGGCGGCAGCCGCGGCATCGGCGCGGCGATCGCGAAACGGCTGGC
GGCCGATGGCGCGGACGTCGCGATCACGTATGAAAAATCGGCTGAGCGGGCACAGGCCGTGGTTGCCGGCATCGAGGCGC
TGGGCCGCAGGGCCGTTGCGATCCAGGCCGACAGCGCCGATCCGGTCGCCGTGCGCAACGCGGTCGATCGTGCCGCGGAA
GTGCTCGGCGGTCTCGACATCCTCGTCAACAACGCGGGGATTTTCCGGGCCGGTGCGGTGGACGACCTCACGCTCGACGA
TATCGACGCGACGCTGAACGTGAACGTGCGTGCGGTGATCGTCGCGTCGCAGGCAGCGGCGCGGCACCTCGGGGAGGGCG
GGCGCATCGTGTCGACCGGCAGTTGCCTCGCGACGCGCGTGCCCGATGCGGGGATGAGCCTCTATGCGGCGAGCAAGGCT
GCGTTGATCGGCTGGACGCAAGGGCTCGCGCGCGACCTCGGCGCGCGCGGCATCACGGTCAACATCGTGCATCCGGGGTC
GACCGATACCGACATGAACCCTGCCGATGGCGAGCATGCCGATGCGCAACGTTCGCGGATGGCGATTCAGCAGTACGGCA
AGGCCGACGACGTGGCCGCGCTCGTGGCGTTCGTCGTCGGGCCGGAAGGGCGATCGATCAACGGGACCGGGTTGACGATC
GACGGCGGGGCGAATGCGTAA

Upstream 100 bases:

>100_bases
GTCGATATCTGTATCGATCGATAAAATAAATCAATTGACTGTGCGGCGCAACTTGCCACATTCTGTGTTGGTCGTTACAT
AAATGAGGAAAGGAACCGAC

Downstream 100 bases:

>100_bases
ACGCCGATGCCCGGCGCGGGTTTGCCGGGTGGAGGTGCGTTCTTTGTTCGTCGTTGTTCGTTATTGGCAGCCGAGGCGCT
GGTGCTCGGCTTCCAGGTCG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVAIQADSADPVAVRNAVDRAAE
VLGGLDILVNNAGIFRAGAVDDLTLDDIDATLNVNVRAVIVASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKA
ALIGWTQGLARDLGARGITVNIVHPGSTDTDMNPADGEHADAQRSRMAIQQYGKADDVAALVAFVVGPEGRSINGTGLTI
DGGANA

Sequences:

>Translated_246_residues
MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVAIQADSADPVAVRNAVDRAAE
VLGGLDILVNNAGIFRAGAVDDLTLDDIDATLNVNVRAVIVASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKA
ALIGWTQGLARDLGARGITVNIVHPGSTDTDMNPADGEHADAQRSRMAIQQYGKADDVAALVAFVVGPEGRSINGTGLTI
DGGANA
>Mature_246_residues
MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVAIQADSADPVAVRNAVDRAAE
VLGGLDILVNNAGIFRAGAVDDLTLDDIDATLNVNVRAVIVASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKA
ALIGWTQGLARDLGARGITVNIVHPGSTDTDMNPADGEHADAQRSRMAIQQYGKADDVAALVAFVVGPEGRSINGTGLTI
DGGANA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=33.6032388663968, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=32.3404255319149, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=32.9411764705882, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=31.3008130081301, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=31.2252964426877, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=32.6530612244898, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=35.4497354497354, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=27.9527559055118, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=28.4, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=27.0588235294118, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI224922801, Length=182, Percent_Identity=31.8681318681319, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=34.020618556701, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI40254986, Length=194, Percent_Identity=30.4123711340206, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4557649, Length=199, Percent_Identity=28.643216080402, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI32455239, Length=183, Percent_Identity=31.6939890710383, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI5031765, Length=183, Percent_Identity=31.6939890710383, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=30.46875, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=30.952380952381, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI2367365, Length=242, Percent_Identity=47.9338842975207, Blast_Score=190, Evalue=7e-50,
Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=37.7510040160643, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=35.15625, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=36.4372469635627, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=34.8, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=33.596837944664, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=33.6099585062241, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=30.6122448979592, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=30.0813008130081, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=32.9317269076305, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=30.9803921568627, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=27.734375, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=34.4, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=32.8301886792453, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=31.5573770491803, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=32.1138211382114, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=32.0158102766798, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=32.8301886792453, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=31.1284046692607, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=29.3172690763052, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=33.0855018587361, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=31.5985130111524, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=32.089552238806, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=32.3308270676692, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=31.6793893129771, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=31.5789473684211, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=27.0992366412214, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=32.7067669172932, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=247, Percent_Identity=31.1740890688259, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=29.9242424242424, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=28.1632653061224, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=243, Percent_Identity=30.0411522633745, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=30.188679245283, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=29.5880149812734, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=271, Percent_Identity=29.8892988929889, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=214, Percent_Identity=31.3084112149533, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=27.4611398963731, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=29.1828793774319, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=242, Percent_Identity=29.7520661157025, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=32.3076923076923, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=27.8350515463918, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=27.710843373494, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=27.6381909547739, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=34.251968503937, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=32.5396825396825, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=31.7647058823529, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571526, Length=261, Percent_Identity=32.183908045977, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=31.2757201646091, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=31.496062992126, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=31.1538461538462, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24641232, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI116007234, Length=241, Percent_Identity=29.8755186721992, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24644337, Length=250, Percent_Identity=30, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24665243, Length=197, Percent_Identity=31.9796954314721, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221331218, Length=197, Percent_Identity=31.9796954314721, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=30, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=28.6458333333333, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571387, Length=235, Percent_Identity=29.3617021276596, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007236, Length=209, Percent_Identity=28.7081339712919, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24665247, Length=198, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221331216, Length=198, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24663911, Length=243, Percent_Identity=28.3950617283951, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648944, Length=196, Percent_Identity=27.5510204081633, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007232, Length=133, Percent_Identity=35.3383458646617, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24656154, Length=206, Percent_Identity=31.0679611650485, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19922628, Length=206, Percent_Identity=31.0679611650485, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641388, Length=208, Percent_Identity=30.2884615384615, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24929; Mature: 24929

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVA
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEE
IQADSADPVAVRNAVDRAAEVLGGLDILVNNAGIFRAGAVDDLTLDDIDATLNVNVRAVI
EEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCEECCCCEEEECCEEEEE
VASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKAALIGWTQGLARDLGARGITV
EECHHHHHHCCCCCEEEECCCEEEECCCCCCCEEEECCCHHEEHHHHHHHHHHCCCCEEE
NIVHPGSTDTDMNPADGEHADAQRSRMAIQQYGKADDVAALVAFVVGPEGRSINGTGLTI
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCEEEE
DGGANA
CCCCCC
>Mature Secondary Structure
MNRLQGKRALITGGSRGIGAAIAKRLAADGADVAITYEKSAERAQAVVAGIEALGRRAVA
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEE
IQADSADPVAVRNAVDRAAEVLGGLDILVNNAGIFRAGAVDDLTLDDIDATLNVNVRAVI
EEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCEECCCCEEEECCEEEEE
VASQAAARHLGEGGRIVSTGSCLATRVPDAGMSLYAASKAALIGWTQGLARDLGARGITV
EECHHHHHHCCCCCEEEECCCEEEECCCCCCCEEEECCCHHEEHHHHHHHHHHCCCCEEE
NIVHPGSTDTDMNPADGEHADAQRSRMAIQQYGKADDVAALVAFVVGPEGRSINGTGLTI
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCEEEE
DGGANA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]