| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690404
Identifier: 116690404
GI number: 116690404
Start: 2648626
End: 2649117
Strand: Direct
Name: 116690404
Synonym: Bcen2424_2384
Alternate gene names: NA
Gene position: 2648626-2649117 (Clockwise)
Preceding gene: 116690399
Following gene: 116690406
Centisome position: 76.02
GC content: 65.45
Gene sequence:
>492_bases ATGTTGCTGGCGCATGCAGCGCAGCACACGAAGATGGGGCAATCAACCGTTCACCACGACGTGCGACACGCGACCACACC TCGTCCATTCGCCGCAGACATGCAGCGAACATTGCGTAGAATTCCGAACCTTCTTCGGTTCAGCACACGGACTTCTCGAA TGATTCGAACGATCGCGGCACTCGCCGCGCTTTCAACGATGACCGCCACGGCAAATGCCGCCGACGCCGGCACGACCGCT GCGAAACAGCGCTACGTCAGCCCGGGCATCGCCAACGTCACTGCGTCGGCCGCACCCCGCCCGGAAAGCACCTCCTCCGA CGCCCGCTGCCGGGAACTGGCCGCCGGCATCGACGCGGTCACTCACTCGCCCGACCGCGGCCAGAAGGTCGTGCGCGGGA TGAGCCCGGACGGCAAGCCGCGCAACGAACTACGCGCCTACGACAAACGGGCCGACCTGGAAGCCGAGCACCAGCGCCTC GGCTGCCAATAA
Upstream 100 bases:
>100_bases CGGGCTCATAACCCGAAGGTCGTAGGTTCAAATCCTACCCCCGCAACCAAATGCCGAAGCCCGCTTTGCGAAAGCAAGCG GGCTTTTTGCTGTCTGGGAG
Downstream 100 bases:
>100_bases CGAACAACGACGAACAAAGAACGCACCTCCACCCGGCAAACCCGCGCCGGGCATCGGCGTTTACGCATTCGCCCCGCCGT CGATCGTCAACCCGGTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAALAALSTMTATANAADAGTTA AKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAVTHSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRL GCQ
Sequences:
>Translated_163_residues MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAALAALSTMTATANAADAGTTA AKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAVTHSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRL GCQ >Mature_163_residues MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAALAALSTMTATANAADAGTTA AKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAVTHSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRL GCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17636; Mature: 17636
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAALSTMTATANAADAGTTAAKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAV HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH THSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRLGCQ CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAALSTMTATANAADAGTTAAKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAV HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH THSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRLGCQ CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA