Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690404

Identifier: 116690404

GI number: 116690404

Start: 2648626

End: 2649117

Strand: Direct

Name: 116690404

Synonym: Bcen2424_2384

Alternate gene names: NA

Gene position: 2648626-2649117 (Clockwise)

Preceding gene: 116690399

Following gene: 116690406

Centisome position: 76.02

GC content: 65.45

Gene sequence:

>492_bases
ATGTTGCTGGCGCATGCAGCGCAGCACACGAAGATGGGGCAATCAACCGTTCACCACGACGTGCGACACGCGACCACACC
TCGTCCATTCGCCGCAGACATGCAGCGAACATTGCGTAGAATTCCGAACCTTCTTCGGTTCAGCACACGGACTTCTCGAA
TGATTCGAACGATCGCGGCACTCGCCGCGCTTTCAACGATGACCGCCACGGCAAATGCCGCCGACGCCGGCACGACCGCT
GCGAAACAGCGCTACGTCAGCCCGGGCATCGCCAACGTCACTGCGTCGGCCGCACCCCGCCCGGAAAGCACCTCCTCCGA
CGCCCGCTGCCGGGAACTGGCCGCCGGCATCGACGCGGTCACTCACTCGCCCGACCGCGGCCAGAAGGTCGTGCGCGGGA
TGAGCCCGGACGGCAAGCCGCGCAACGAACTACGCGCCTACGACAAACGGGCCGACCTGGAAGCCGAGCACCAGCGCCTC
GGCTGCCAATAA

Upstream 100 bases:

>100_bases
CGGGCTCATAACCCGAAGGTCGTAGGTTCAAATCCTACCCCCGCAACCAAATGCCGAAGCCCGCTTTGCGAAAGCAAGCG
GGCTTTTTGCTGTCTGGGAG

Downstream 100 bases:

>100_bases
CGAACAACGACGAACAAAGAACGCACCTCCACCCGGCAAACCCGCGCCGGGCATCGGCGTTTACGCATTCGCCCCGCCGT
CGATCGTCAACCCGGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAALAALSTMTATANAADAGTTA
AKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAVTHSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRL
GCQ

Sequences:

>Translated_163_residues
MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAALAALSTMTATANAADAGTTA
AKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAVTHSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRL
GCQ
>Mature_163_residues
MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAALAALSTMTATANAADAGTTA
AKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAVTHSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRL
GCQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17636; Mature: 17636

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALSTMTATANAADAGTTAAKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAV
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
THSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRLGCQ
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure
MLLAHAAQHTKMGQSTVHHDVRHATTPRPFAADMQRTLRRIPNLLRFSTRTSRMIRTIAA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALSTMTATANAADAGTTAAKQRYVSPGIANVTASAAPRPESTSSDARCRELAAGIDAV
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
THSPDRGQKVVRGMSPDGKPRNELRAYDKRADLEAEHQRLGCQ
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA