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The map label for this gene is intS [C]

Identifier: 116690396

GI number: 116690396

Start: 2643140

End: 2643361

Strand: Direct

Name: intS [C]

Synonym: Bcen2424_2376

Alternate gene names: 116690396

Gene position: 2643140-2643361 (Clockwise)

Preceding gene: 116690394

Following gene: 116690399

Centisome position: 75.87

GC content: 55.41

Gene sequence:

>222_bases
ATGCCGAAGCAAACCGATCCTCTCACTGACTTGAAGGTGCGTCGCGCGAAGCCTGCCGAGCAGCCTTACCGTCTTGCAGA
CGGCAAGGGGCTTTATCTCCAGGTCATGCCGAACGGCTCCAAGTACTGGCGCATGAAGTATCGATTCGATGGGAAAAAAA
CTCGCGTCGTTCTGCATCGCTCAATCCCCGATCAACTACCGCGCTCGACCCATATCTCGTAA

Upstream 100 bases:

>100_bases
CTGCCATCATTGCCCACGACTGCCCAGTACAAGCCAAGCACCTTGGGGGTATCAGTGGGGATATACCCCGAAGTGCTCGG
CGTCGATACCCCAACGCAAA

Downstream 100 bases:

>100_bases
CCTTTCCCTGGCACGCACGCGCCGCCGCTATCAAGGAGTACGAGTCATTTCATGGTGGGATGTGGATTTCCGAATAGCTA
CGGCGCCAATCGATTCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage Integrase; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase Phage Integrase Family Protein; DNA Integration/Recombination/Inversion Protein; CP4-Like Integrase; Prophage Integrase; Site-Specific Recombinase; Cp4-Like Integrase Protein; Prophage CP4-Like Integrase

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MPKQTDPLTDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSKYWRMKYRFDGKKTRVVLHRSIPDQLPRSTHIS

Sequences:

>Translated_73_residues
MPKQTDPLTDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSKYWRMKYRFDGKKTRVVLHRSIPDQLPRSTHIS
>Mature_72_residues
PKQTDPLTDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSKYWRMKYRFDGKKTRVVLHRSIPDQLPRSTHIS

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8567; Mature: 8436

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQTDPLTDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSKYWRMKYRFDGKKTRVVLHR
CCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEECCCEEEEEEEC
SIPDQLPRSTHIS
CCCCCCCCCCCCC
>Mature Secondary Structure 
PKQTDPLTDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSKYWRMKYRFDGKKTRVVLHR
CCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEECCCEEEEEEEC
SIPDQLPRSTHIS
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA