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The map label for this gene is tnpR [H]

Identifier: 116690394

GI number: 116690394

Start: 2640838

End: 2641416

Strand: Direct

Name: tnpR [H]

Synonym: Bcen2424_2374

Alternate gene names: 116690394

Gene position: 2640838-2641416 (Clockwise)

Preceding gene: 116690389

Following gene: 116690396

Centisome position: 75.8

GC content: 60.45

Gene sequence:

>579_bases
ATGGTGTCCCGAACCTTCGCATACGCTCGCGTCAGCACGGCCGACCAGACGGTAGCTAACCAACTCCGCGAGATCGAGGC
GGCTGGCTTCAATGTCGACAAGCGCCGGGTCGTAACGGAAAGCATCTCGGGTAGCGTAAGCGCGGACCAGCGGCCAGGGT
TTGCGGACTTGCTCCGCAGACTGGAAGAAGGCGACGTGTTGATCGTTACGAAGCTCGACCGGCTTGGCCGAAATGCTATG
GACGTACGCGCAACCGTGGAGACATTGGCGGAGAGAGGCATTCGGATTCATTGCCTTGCGCTTGGCGGCGTTGACCTGAC
CAGTGCGGCCGGCCGGATGACGATGCAGGTATTGAACGCTGTTGCTGAGTTTGAGCGCGATCTGCTGATCGAACGCACAC
AAGCCGGCATCGCCCGAGCAAAGGCGGAAGGGAAAGCGATGGGACGTCCCTCTGCGCTCACCAAGCAACAGCAGGACGAA
GTTCGCAAGCAGTTGAGTCAGGGGGCGAGCGTGGCGAGTCTAGCGAAGTGCTACGGCACGAGCCGTCAAACGATTATGCG
GGTGCGCGATGCAGTTTGA

Upstream 100 bases:

>100_bases
CCTTGCGGACATGGGTACGAATGGATGTTCGAAAATAAGGCTTTGCTATTTTCGTACAGGGGTTATAATTCGTACACCCC
TTTTGAACACATTGGAGCCC

Downstream 100 bases:

>100_bases
TTACTTCAAGTTACTTTGCGCTTGCACCTGTGTGACGCTTCTCCCGCGCGTCATCAGGGATTTCTTGCTCATAGAACCAG
TAGTCGTTTTTCAGATCATT

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVSRTFAYARVSTADQTVANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRLEEGDVLIVTKLDRLGRNAM
DVRATVETLAERGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARAKAEGKAMGRPSALTKQQQDE
VRKQLSQGASVASLAKCYGTSRQTIMRVRDAV

Sequences:

>Translated_192_residues
MVSRTFAYARVSTADQTVANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRLEEGDVLIVTKLDRLGRNAM
DVRATVETLAERGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARAKAEGKAMGRPSALTKQQQDE
VRKQLSQGASVASLAKCYGTSRQTIMRVRDAV
>Mature_192_residues
MVSRTFAYARVSTADQTVANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRLEEGDVLIVTKLDRLGRNAM
DVRATVETLAERGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARAKAEGKAMGRPSALTKQQQDE
VRKQLSQGASVASLAKCYGTSRQTIMRVRDAV

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787638, Length=188, Percent_Identity=57.9787234042553, Blast_Score=231, Evalue=2e-62,
Organism=Escherichia coli, GI1787827, Length=188, Percent_Identity=57.4468085106383, Blast_Score=230, Evalue=4e-62,
Organism=Escherichia coli, GI1787404, Length=181, Percent_Identity=37.0165745856354, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 20892; Mature: 20892

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRTFAYARVSTADQTVANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRR
CCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LEEGDVLIVTKLDRLGRNAMDVRATVETLAERGIRIHCLALGGVDLTSAAGRMTMQVLNA
HCCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHH
VAEFERDLLIERTQAGIARAKAEGKAMGRPSALTKQQQDEVRKQLSQGASVASLAKCYGT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SRQTIMRVRDAV
CHHHHHHHHHCC
>Mature Secondary Structure
MVSRTFAYARVSTADQTVANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRR
CCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LEEGDVLIVTKLDRLGRNAMDVRATVETLAERGIRIHCLALGGVDLTSAAGRMTMQVLNA
HCCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHH
VAEFERDLLIERTQAGIARAKAEGKAMGRPSALTKQQQDEVRKQLSQGASVASLAKCYGT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SRQTIMRVRDAV
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027041 [H]