| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116690389
Identifier: 116690389
GI number: 116690389
Start: 2636584
End: 2637048
Strand: Direct
Name: 116690389
Synonym: Bcen2424_2369
Alternate gene names: NA
Gene position: 2636584-2637048 (Clockwise)
Preceding gene: 116690384
Following gene: 116690394
Centisome position: 75.68
GC content: 65.16
Gene sequence:
>465_bases ATGGCGATCATCGTGACTTCGTTCGGCAGGCGGTATTTAGACATGGCGCACCTCCAGAATCGATGCGAGGAGTCGCCCGA CGTCGATCGTGCAATCCAGCTCCGCTTCGCCGCGAATCGGCGTGAGGTTCCAGTCGTGGACGGCCGCATGCGTGAACTCG CCGAATCGCCGGTCGTAGACGCCGCGCCCCGAGACGGGGCCGCCCAAGATCCGCACGCGCCAATCGTGATCAGGCGTCGG GCGAGCCGATGCCACCTCGACCAGCATGCCGATACGCGAGCGAGCATCGCATTTCGTGACGATCGCGAGATCGCCAATCT TGCAGCGCAGCTCAGCCATGACGCACCTCCGCACGGACGAGCGCGGCGATCGCTGCCAGTGCCGCGCCGGTTGCGTCGAG CGCGTCTTGATACGTGCTGGCGGTTGCCGCGTCGCGCAATGCTGCGCGGACGATGGATTGAATGA
Upstream 100 bases:
>100_bases CCCCATGTCGACGAGCGCTCGCTCGTAGGTGCCCTCCGCAAGATGCGAACGGACAGCATCGAACAGGGCTTCGAGCTGGG CGAACTGATGGGCCGCACAC
Downstream 100 bases:
>100_bases GGTGGGATTGCTGCCCGGTACGGGCGTGCATGGACTGGCGCATGGATTGCGACCTCCTCTGGTGGGTTGAACCACCCGGA CCTCAACGCCAATTGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAIIVTSFGRRYLDMAHLQNRCEESPDVDRAIQLRFAANRREVPVVDGRMRELAESPVVDAAPRDGAAQDPHAPIVIRRR ASRCHLDQHADTRASIAFRDDREIANLAAQLSHDAPPHGRARRSLPVPRRLRRARLDTCWRLPRRAMLRGRWIE
Sequences:
>Translated_154_residues MAIIVTSFGRRYLDMAHLQNRCEESPDVDRAIQLRFAANRREVPVVDGRMRELAESPVVDAAPRDGAAQDPHAPIVIRRR ASRCHLDQHADTRASIAFRDDREIANLAAQLSHDAPPHGRARRSLPVPRRLRRARLDTCWRLPRRAMLRGRWIE >Mature_153_residues AIIVTSFGRRYLDMAHLQNRCEESPDVDRAIQLRFAANRREVPVVDGRMRELAESPVVDAAPRDGAAQDPHAPIVIRRRA SRCHLDQHADTRASIAFRDDREIANLAAQLSHDAPPHGRARRSLPVPRRLRRARLDTCWRLPRRAMLRGRWIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17707; Mature: 17575
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIVTSFGRRYLDMAHLQNRCEESPDVDRAIQLRFAANRREVPVVDGRMRELAESPVVD CEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC AAPRDGAAQDPHAPIVIRRRASRCHLDQHADTRASIAFRDDREIANLAAQLSHDAPPHGR CCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC ARRSLPVPRRLRRARLDTCWRLPRRAMLRGRWIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AIIVTSFGRRYLDMAHLQNRCEESPDVDRAIQLRFAANRREVPVVDGRMRELAESPVVD EEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC AAPRDGAAQDPHAPIVIRRRASRCHLDQHADTRASIAFRDDREIANLAAQLSHDAPPHGR CCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC ARRSLPVPRRLRRARLDTCWRLPRRAMLRGRWIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA