| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690361
Identifier: 116690361
GI number: 116690361
Start: 2603499
End: 2604194
Strand: Direct
Name: 116690361
Synonym: Bcen2424_2341
Alternate gene names: NA
Gene position: 2603499-2604194 (Clockwise)
Preceding gene: 116690357
Following gene: 116690362
Centisome position: 74.73
GC content: 64.66
Gene sequence:
>696_bases ATGAGTCACATCCACTTCATTGGCGGGGAAAAAGGCGGCGTCGGCAAATCGCTCGCGGCCCGCGTGCTGGCCCAGTATTT CATCGATCGGAGCATGCCCTTCGTGGGCTTCGATACCGACCGATCGCACGGCGCGCTCCTGCGGTTCTATGCCGATTTTG CCGCGCCCGCCGTGCTCGACCAGCATGACAGCCTCGATCCGGTCATGGAATCGGCGCTCGAGGATCCGCAACGGCGCATA CTGGTGGATCTCGCGGCCCAGACGCGGCAGTCGCTCGCCAAGTGGCTCGACGATTCGGACGTAGTCGACTTCGCCGAGGA ACACGGCCTCACGCTGACGTGGTGGCACGTGATGGACACTGGCCGCGATTCGGTCGATCTGCTGCGGCAATGGCTCGACG AATTCGGCGGACGAATCAAGCTGGTGCTCGTGCTGAATGAAGTCCGCGGCGATCGCTTCGAGATTCTGGAGGCCTCCGGC GAACGCGAGCGGGCCGAAGCCCTTGGCGCCAGCGTGATTACGCTGCGCCGCCTGCCCGATACGACCATGCAGAAGATCGA TCGGCAAAGCGCGAGCTTCTGGGCGGCGGTCAATCATCCGGACCGCGCCGCCACGGGGCTCGGCTTGCTGGAGCGGCAGC GCGTCAAGGTCTGGCTGCATCGTACTTACGAGGAGCTGGGCACGCTCGCCCTGTAG
Upstream 100 bases:
>100_bases TGCATTTTCTTTCGACGGGACCGGTTGCGCCGTAACGTCATCGAAGCCTGCCAATATCCGCTCTGGCCATACCTGCTCCA TTACACGGGATTTCGTAAGC
Downstream 100 bases:
>100_bases CACGGGCCCGTGACGGCGCGGAATGTGCGGCGGTTGGGTTGGCATGGCTCATACCGGGAAAACTTGGAGGCTCGATGGCC GATCACGACAGACTGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: TraL Protein; Oxyanion-Translocating ATPase; Mobilization Protein MobD-Like Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSHIHFIGGEKGGVGKSLAARVLAQYFIDRSMPFVGFDTDRSHGALLRFYADFAAPAVLDQHDSLDPVMESALEDPQRRI LVDLAAQTRQSLAKWLDDSDVVDFAEEHGLTLTWWHVMDTGRDSVDLLRQWLDEFGGRIKLVLVLNEVRGDRFEILEASG ERERAEALGASVITLRRLPDTTMQKIDRQSASFWAAVNHPDRAATGLGLLERQRVKVWLHRTYEELGTLAL
Sequences:
>Translated_231_residues MSHIHFIGGEKGGVGKSLAARVLAQYFIDRSMPFVGFDTDRSHGALLRFYADFAAPAVLDQHDSLDPVMESALEDPQRRI LVDLAAQTRQSLAKWLDDSDVVDFAEEHGLTLTWWHVMDTGRDSVDLLRQWLDEFGGRIKLVLVLNEVRGDRFEILEASG ERERAEALGASVITLRRLPDTTMQKIDRQSASFWAAVNHPDRAATGLGLLERQRVKVWLHRTYEELGTLAL >Mature_230_residues SHIHFIGGEKGGVGKSLAARVLAQYFIDRSMPFVGFDTDRSHGALLRFYADFAAPAVLDQHDSLDPVMESALEDPQRRIL VDLAAQTRQSLAKWLDDSDVVDFAEEHGLTLTWWHVMDTGRDSVDLLRQWLDEFGGRIKLVLVLNEVRGDRFEILEASGE RERAEALGASVITLRRLPDTTMQKIDRQSASFWAAVNHPDRAATGLGLLERQRVKVWLHRTYEELGTLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26051; Mature: 25920
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHIHFIGGEKGGVGKSLAARVLAQYFIDRSMPFVGFDTDRSHGALLRFYADFAAPAVLD CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHCHHHHC QHDSLDPVMESALEDPQRRILVDLAAQTRQSLAKWLDDSDVVDFAEEHGLTLTWWHVMDT CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEECC GRDSVDLLRQWLDEFGGRIKLVLVLNEVRGDRFEILEASGERERAEALGASVITLRRLPD CCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC TTMQKIDRQSASFWAAVNHPDRAATGLGLLERQRVKVWLHRTYEELGTLAL HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SHIHFIGGEKGGVGKSLAARVLAQYFIDRSMPFVGFDTDRSHGALLRFYADFAAPAVLD CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHCHHHHC QHDSLDPVMESALEDPQRRILVDLAAQTRQSLAKWLDDSDVVDFAEEHGLTLTWWHVMDT CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEECC GRDSVDLLRQWLDEFGGRIKLVLVLNEVRGDRFEILEASGERERAEALGASVITLRRLPD CCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC TTMQKIDRQSASFWAAVNHPDRAATGLGLLERQRVKVWLHRTYEELGTLAL HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA