| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is yggL [C]
Identifier: 116690323
GI number: 116690323
Start: 2556921
End: 2557340
Strand: Direct
Name: yggL [C]
Synonym: Bcen2424_2302
Alternate gene names: 116690323
Gene position: 2556921-2557340 (Clockwise)
Preceding gene: 116690322
Following gene: 116690324
Centisome position: 73.39
GC content: 65.95
Gene sequence:
>420_bases ATGCGGCGTCCGGGCCGTTCGCGCATGCCGCGCCAGCGCCGGCCGCCGCCCTTTCATCGACCCTTTTCGCATTCACCACA CACCATGAGCCAAGGCCACAACCGCCGCCAGCGCAAGAAACTCCACATCGGCGAATTCCAGGAACTCTCGTTCAACGCCA CCGCGCATTACCGCAATGAAATGACCGACCTCGAGCGCGGCCAGTTGATCGATGCATTCATCGACTTCGTCGAAGCGAAC GGGCTGCTGACCGTCGCGTCCGCGGACGAAGGCATCGGCGCGTACGTGATCTCTGGCGCGCCGCGCGGCACGACGACCGA CGCCGACCGCGAACTCGTGCGCGGGTGGCTGGCCGCCCGTCCGGAACTGAAGGACGTCCAGGTCAGCGAATTCGCCGACG CGTGGTATCCGGACGCCTGA
Upstream 100 bases:
>100_bases GTCGCTGCAGGTGGAGTCGAATCTGAGCCAGGAGCAGTACGATATCGTGCTGATGTAACCTTCCGCCCATCCGCCGCCGG CATCGCCGCGCGGCGCCCCG
Downstream 100 bases:
>100_bases TTTTCCGGTTTCACGCTGTTTCAGACAGCAGCCGCGCCTGCGCCGCGTCCGCCGAATGGCCATGATTGCAGCAGGCGTTG CGGCGCGGTTGCCGCGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRRPGRSRMPRQRRPPPFHRPFSHSPHTMSQGHNRRQRKKLHIGEFQELSFNATAHYRNEMTDLERGQLIDAFIDFVEAN GLLTVASADEGIGAYVISGAPRGTTTDADRELVRGWLAARPELKDVQVSEFADAWYPDA
Sequences:
>Translated_139_residues MRRPGRSRMPRQRRPPPFHRPFSHSPHTMSQGHNRRQRKKLHIGEFQELSFNATAHYRNEMTDLERGQLIDAFIDFVEAN GLLTVASADEGIGAYVISGAPRGTTTDADRELVRGWLAARPELKDVQVSEFADAWYPDA >Mature_139_residues MRRPGRSRMPRQRRPPPFHRPFSHSPHTMSQGHNRRQRKKLHIGEFQELSFNATAHYRNEMTDLERGQLIDAFIDFVEAN GLLTVASADEGIGAYVISGAPRGTTTDADRELVRGWLAARPELKDVQVSEFADAWYPDA
Specific function: Unknown
COG id: COG3171
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15841; Mature: 15841
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPGRSRMPRQRRPPPFHRPFSHSPHTMSQGHNRRQRKKLHIGEFQELSFNATAHYRNE CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHH MTDLERGQLIDAFIDFVEANGLLTVASADEGIGAYVISGAPRGTTTDADRELVRGWLAAR HHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCC PELKDVQVSEFADAWYPDA CCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MRRPGRSRMPRQRRPPPFHRPFSHSPHTMSQGHNRRQRKKLHIGEFQELSFNATAHYRNE CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHH MTDLERGQLIDAFIDFVEANGLLTVASADEGIGAYVISGAPRGTTTDADRELVRGWLAAR HHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCC PELKDVQVSEFADAWYPDA CCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA