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The map label for this gene is rng [H]

Identifier: 116690322

GI number: 116690322

Start: 2555409

End: 2556878

Strand: Direct

Name: rng [H]

Synonym: Bcen2424_2301

Alternate gene names: 116690322

Gene position: 2555409-2556878 (Clockwise)

Preceding gene: 116690321

Following gene: 116690323

Centisome position: 73.35

GC content: 65.37

Gene sequence:

>1470_bases
ATGAACGAAGAAATCCTGATCAACCTCACGCCGCAGGAAACGCGCGTCGCACTCGTCCAGCAAGGCGCGGTGCAGGAGCT
TCACGTCGAGCGCACGCTGTCGCGCGGGCGGGTCGGCAACATCTATCTCGGCAAGGTCGTGCGTGTGCTGCCCGGCATGC
AGTCGGCGTTCATCGACATCGGCCTCGAACGCGCGGCGTTCCTGCACGTCGCCGACATCTGGCATCCGCGCCTCGCGGGC
GAGCCGCAGTCGGGCGCGCCGCACCAGCCGATCGAGAAGATCGTGTTCGAGGGCCAGACGCTGATGGTCCAGGTGATCAA
GGACCCGATCGGCACGAAGGGCGCGCGGCTGTCGACGCAGGTCAGTATCGCGGGGCGCACGCTCGTCTACCTGCCGCAGG
AGCCGCATATCGGCATCTCGCAGAAAATCGAGAGCGAGGCCGAGCGCGAGGCCGTGCGCGCGCGCCTGACGGCCGTGATC
CCGCCGGACGAGAAAGGCGGCTACATCGTGCGCACGATCGCCGAGGATGCGACCTCCGACGAACTGGCCGGCGACGTCAC
GTACCTGCGCAAGACCTGGGCGACGATCGTCGCACAAGCGCAGCGTCTACCGGCGACGAGCCTGCTGTATCAGGATCTCG
ATCTCGCGCAGCGCGTGCTGCGCGATTTCGCGAACGACGACACGACGCGCATCCAGGTCGACTCGCGCGAGACGTACCAG
CGCCTGTCGGAATTCGCGGGCGAATTCACGCCGGCCGTGAGCCCGAAGCTGCATCACTACACGGGCGAGCGGCCGCTGTT
CGACCTGTACAACATCGAGACGGAGATCCAGCGCGCGTTGTCGCGTCGCGTCGACCTGAAATCGGGCGGCTACCTGATGA
TCGACCAGACCGAGGCGATGACGACGATCGACGTGAACACGGGCGGCTATGTCGGCGCGCGCAACTTCGACGACACGATC
TTCAAGACCAACCTCGAGGCCGCGCATACGATCGCGCGGCAACTGCGGCTGCGCAACCTCGGCGGGATCATCATCATCGA
CTTCATCGACATGGAGAACGCCGAGCACCGCGACGCGGTGCTGTCCGAGCTGAAGAAGGCGCTGTCGCGCGACCGCACGC
GCGTGACGGTCAACGGTTTCTCGCAGCTCGGGCTCGTCGAGATGACGCGCAAACGCACGCGCGAATCGCTCGCGCACGTG
CTGTGCGAACCGTGCCCGACCTGCCAGGGCAAGGGCCAGGTGAAGACGTCGCGCACCGTGTGCTACGACATCCTGCGCGA
AATCCTGCGCGAGTCGCGGCAGTTCAACCCGCGTGAGTTTCGCGTGATCGCCGCGCAGCAGGTGATCGACCTGTTCCTCG
ACGAGGAGTCGCAGCATCTGGCGATGCTGATCGACTTCATCGGCAAGCCGGTGTCGCTGCAGGTGGAGTCGAATCTGAGC
CAGGAGCAGTACGATATCGTGCTGATGTAA

Upstream 100 bases:

>100_bases
TCGAGCGAATCGACGGGTCCCATTCAGGTATCATGGGTCTGCCCCTTTTTGAGACTGCCGCGCTGCTGCGTACCGCACGC
GTCGCCTTCTGAACCGCACC

Downstream 100 bases:

>100_bases
CCTTCCGCCCATCCGCCGCCGGCATCGCCGCGCGGCGCCCCGATGCGGCGTCCGGGCCGTTCGCGCATGCCGCGCCAGCG
CCGGCCGCCGCCCTTTCATC

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQSGAPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVI
PPDEKGGYIVRTIAEDATSDELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM

Sequences:

>Translated_489_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQSGAPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVI
PPDEKGGYIVRTIAEDATSDELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
>Mature_489_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQSGAPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVI
PPDEKGGYIVRTIAEDATSDELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=493, Percent_Identity=56.3894523326572, Blast_Score=541, Evalue=1e-155,
Organism=Escherichia coli, GI1787325, Length=458, Percent_Identity=37.7729257641921, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 54996; Mature: 54996

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHH
GLERAAFLHVADIWHPRLAGEPQSGAPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPDEKGGYIVRTIAEDATSD
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCH
ELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAM
HHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
EEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
CYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
HHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCC
QEQYDIVLM
CCCCCEEEC
>Mature Secondary Structure
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHH
GLERAAFLHVADIWHPRLAGEPQSGAPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPDEKGGYIVRTIAEDATSD
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCH
ELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAM
HHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
EEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
CYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
HHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCC
QEQYDIVLM
CCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]