| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is nuoL [H]
Identifier: 116690259
GI number: 116690259
Start: 2492252
End: 2494306
Strand: Reverse
Name: nuoL [H]
Synonym: Bcen2424_2238
Alternate gene names: 116690259
Gene position: 2494306-2492252 (Counterclockwise)
Preceding gene: 116690260
Following gene: 116690258
Centisome position: 71.6
GC content: 63.16
Gene sequence:
>2055_bases ATGTCAACGACACTCAATGAAAACCTGCTGCTGGCGATTCCGCTCGCTCCGCTGGCCGGCTCGCTGATTGCGGGGCTGTT CGGGAACGCAGTCGGGCGCAAGGGCGCACACCGGATCACGATCCTCGGCGTATTGATCGCGTTCCTCCTGTCGGCGAAAG TCTTCTTCGACGTGATGGGCGGCGCAAGCTTCAACGCGACCGTCTACGAATGGATGAACGTCGGCTCGCTGAAGCTCGAA GTCGGCTTCCTCGTCGATTCGCTGACCGCGATGATGATGGTCGTCGTGACCTTCGTCTCGCTGATGGTGCACGTGTACAC GATCGGCTACATGGCGGAGGAAGACGGCTACCAGCGCTTCTTCTCGTACATCTCGCTGTTCACGTTCTCGATGCTGATGC TCGTGATGAGCAACAACTTCCTGCAGCTGTTCTTCGGCTGGGAAGCGGTGGGTCTGGTGTCGTACCTGCTGATCGGCTTC TACTTCACGCGTGAGAGCGCGATCTACGCGAACATGAAGGCGTTCCTCGTGAACCGCGTGGGCGACTTCGGCTTCCTGCT CGGCATCGGCCTGTTGCTCGCGTTCGCCGGCTCGATGAACTACGGCGAAGTGTTCGCGAAGCGCGCCGAACTGGCGAGCC TGCACTTCCCGGGCACCGACTGGGGCCTGCTGACCGTTGCCTGTATCTGCCTGTTCATCGGCGCGATGGGTAAGTCGGCC CAGTTCCCGCTGCACGTGTGGCTGCCGGACTCGATGGAAGGCCCGACCCCGATCTCGGCGCTGATTCACGCGGCGACGAT GGTGACGGCCGGCATCTTCATGGTGTCGCGCATGTCGCCGCTGTTCGAACTGTCGGATACCGCGCTGTCGTTCATCACGG TGATCGGCGCGATCACGGCGCTCTTCATGGGCTTCCTGGGCATCGTCCAGAACGACATCAAGCGCGTGGTCGCGTACTCG ACGCTGTCGCAGCTCGGCTACATGACCGTCGCGCTCGGCGTGTCCGCTTACCCGGTCGCCGTGTTCCACCTGATGACGCA CGCGTTCTTCAAGGCGCTGCTGTTCCTCGGCGCCGGCTCGGTCATCATGGGCATGCACCACGACCAGGACATGCGCAACA TGGGCGGCCTGCGCAAGTACATGCCGATCACGTGGATCACGTCGCTCGTCGGTTCGCTCGCGCTGATCGGCACGCCGTTC TTCTCGGGCTTCTACTCGAAGGACTCGATCATCGACGCGGTGAAGCTGTCGCACCTGCCGGGTTCGGGCTTCGCGTACTT CGCGGTCGTCGCGAGCGTGTTCGTCACGGCGCTGTACTCGTTCCGCATGTACTTCCTGGTGTTCCACGGCGAGGAGCGCT TCCGCAAGCCGAAGCATCCGGAATCGCCGATGGGCATGGCGGCCGCGCACGGTCACGACGATCACGGCCATGGCCACGGT CATGACGACCACGCGCACGAGCCGCACGAGACCCCGTGGGTCGTGTGGGTGCCGCTGGTCCTGCTGGCGATCCCGTCGGT GATCATCGGCGCGATCGCGATCAGCCCGATGCTGTTCGGCGATTTCTTCCAGCACGGCGTCGCATTCGACAAGGTGATCT TCATCGGCGAAAACCATCCGGCACTCGCCGAGATGGCCGAAGAGTTCCACGGCTGGGTTGGCATGGGCCTGCACTCGGTG TCGGGCCTGCCGGTGTGGCTGGCGCTTGCCGGCGTGGTCGTCGCGTGGTTCCTGTACCTGAAGCGTCCGGAGCTGCCGGC GTCGATCCGCCGCGCGTTCGGCCCGATCTACACGCTGCTGGACAACAAGTACTACATGGACAAGATCAACGAAGTGGTGT TCGCCCGGGGTTCGGTGGCGATCGGCCGCGGCCTGTGGAAGGAGGGTGACGTCGTGGTGATCGACGGCCTCGTCAACGGC AGCGCCCGGTTCATCGGCTGGTTCGCCGGCGTGATCCGCTTCCTCCAATCCGGTTACATCTATCACTACGCGTTCGCCAT GATCATCGGCATGCTGGGGCTCCTGACCCTGTTTGTAACGCTCGGCGGCAAATAA
Upstream 100 bases:
>100_bases CGATCGGCCTCGCGATTCTGGTGACCCTGTTCCGTAAGCTCGACACGATCAATGTCGAGGATCTCGATCAGCTCAAAGGT TAATTTCAGGCTACGCTGTT
Downstream 100 bases:
>100_bases GGCGGGGAGACAACACTAATGCACGCTTTTCCGATTCTCAGTACCGCGATCTGGCTGCCGATCGTTTTCGGCCTCCTCGT GCTGGCGGTAGGTAACGACA
Product: NADH dehydrogenase subunit L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit L; NDH-1 subunit L [H]
Number of amino acids: Translated: 684; Mature: 683
Protein sequence:
>684_residues MSTTLNENLLLAIPLAPLAGSLIAGLFGNAVGRKGAHRITILGVLIAFLLSAKVFFDVMGGASFNATVYEWMNVGSLKLE VGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMAEEDGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGF YFTRESAIYANMKAFLVNRVGDFGFLLGIGLLLAFAGSMNYGEVFAKRAELASLHFPGTDWGLLTVACICLFIGAMGKSA QFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVSRMSPLFELSDTALSFITVIGAITALFMGFLGIVQNDIKRVVAYS TLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLGAGSVIMGMHHDQDMRNMGGLRKYMPITWITSLVGSLALIGTPF FSGFYSKDSIIDAVKLSHLPGSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPESPMGMAAAHGHDDHGHGHG HDDHAHEPHETPWVVWVPLVLLAIPSVIIGAIAISPMLFGDFFQHGVAFDKVIFIGENHPALAEMAEEFHGWVGMGLHSV SGLPVWLALAGVVVAWFLYLKRPELPASIRRAFGPIYTLLDNKYYMDKINEVVFARGSVAIGRGLWKEGDVVVIDGLVNG SARFIGWFAGVIRFLQSGYIYHYAFAMIIGMLGLLTLFVTLGGK
Sequences:
>Translated_684_residues MSTTLNENLLLAIPLAPLAGSLIAGLFGNAVGRKGAHRITILGVLIAFLLSAKVFFDVMGGASFNATVYEWMNVGSLKLE VGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMAEEDGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGF YFTRESAIYANMKAFLVNRVGDFGFLLGIGLLLAFAGSMNYGEVFAKRAELASLHFPGTDWGLLTVACICLFIGAMGKSA QFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVSRMSPLFELSDTALSFITVIGAITALFMGFLGIVQNDIKRVVAYS TLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLGAGSVIMGMHHDQDMRNMGGLRKYMPITWITSLVGSLALIGTPF FSGFYSKDSIIDAVKLSHLPGSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPESPMGMAAAHGHDDHGHGHG HDDHAHEPHETPWVVWVPLVLLAIPSVIIGAIAISPMLFGDFFQHGVAFDKVIFIGENHPALAEMAEEFHGWVGMGLHSV SGLPVWLALAGVVVAWFLYLKRPELPASIRRAFGPIYTLLDNKYYMDKINEVVFARGSVAIGRGLWKEGDVVVIDGLVNG SARFIGWFAGVIRFLQSGYIYHYAFAMIIGMLGLLTLFVTLGGK >Mature_683_residues STTLNENLLLAIPLAPLAGSLIAGLFGNAVGRKGAHRITILGVLIAFLLSAKVFFDVMGGASFNATVYEWMNVGSLKLEV GFLVDSLTAMMMVVVTFVSLMVHVYTIGYMAEEDGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFY FTRESAIYANMKAFLVNRVGDFGFLLGIGLLLAFAGSMNYGEVFAKRAELASLHFPGTDWGLLTVACICLFIGAMGKSAQ FPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVSRMSPLFELSDTALSFITVIGAITALFMGFLGIVQNDIKRVVAYST LSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLGAGSVIMGMHHDQDMRNMGGLRKYMPITWITSLVGSLALIGTPFF SGFYSKDSIIDAVKLSHLPGSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPESPMGMAAAHGHDDHGHGHGH DDHAHEPHETPWVVWVPLVLLAIPSVIIGAIAISPMLFGDFFQHGVAFDKVIFIGENHPALAEMAEEFHGWVGMGLHSVS GLPVWLALAGVVVAWFLYLKRPELPASIRRAFGPIYTLLDNKYYMDKINEVVFARGSVAIGRGLWKEGDVVVIDGLVNGS ARFIGWFAGVIRFLQSGYIYHYAFAMIIGMLGLLTLFVTLGGK
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=386, Percent_Identity=40.4145077720207, Blast_Score=288, Evalue=9e-78, Organism=Escherichia coli, GI1788614, Length=617, Percent_Identity=38.2495948136143, Blast_Score=356, Evalue=3e-99, Organism=Escherichia coli, GI1788829, Length=416, Percent_Identity=29.3269230769231, Blast_Score=152, Evalue=8e-38, Organism=Escherichia coli, GI1788831, Length=352, Percent_Identity=30.1136363636364, Blast_Score=135, Evalue=1e-32, Organism=Escherichia coli, GI1788827, Length=464, Percent_Identity=28.0172413793103, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI2367154, Length=125, Percent_Identity=36, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI1788613, Length=332, Percent_Identity=26.5060240963855, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI145693160, Length=321, Percent_Identity=25.2336448598131, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR002128 - InterPro: IPR003945 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF01010 Oxidored_q1_C; PF00662 Oxidored_q1_N [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 74844; Mature: 74713
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLNENLLLAIPLAPLAGSLIAGLFGNAVGRKGAHRITILGVLIAFLLSAKVFFDVMG CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GASFNATVYEWMNVGSLKLEVGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMAEEDGYQRF CCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFYFTRESAIYANMKAFLVNRV HHHHHHHHHHHHHHHHCCCCEEEHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC GDFGFLLGIGLLLAFAGSMNYGEVFAKRAELASLHFPGTDWGLLTVACICLFIGAMGKSA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC QFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVSRMSPLFELSDTALSFITVIGAITA CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LFMGFLGIVQNDIKRVVAYSTLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLGAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH VIMGMHHDQDMRNMGGLRKYMPITWITSLVGSLALIGTPFFSGFYSKDSIIDAVKLSHLP HEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCC GSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPESPMGMAAAHGHDDHGHGHG CCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCCCCCCHHCCCCCCCCCCCC HDDHAHEPHETPWVVWVPLVLLAIPSVIIGAIAISPMLFGDFFQHGVAFDKVIFIGENHP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC ALAEMAEEFHGWVGMGLHSVSGLPVWLALAGVVVAWFLYLKRPELPASIRRAFGPIYTLL HHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DNKYYMDKINEVVFARGSVAIGRGLWKEGDVVVIDGLVNGSARFIGWFAGVIRFLQSGYI CCCHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCH YHYAFAMIIGMLGLLTLFVTLGGK HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STTLNENLLLAIPLAPLAGSLIAGLFGNAVGRKGAHRITILGVLIAFLLSAKVFFDVMG CCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GASFNATVYEWMNVGSLKLEVGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMAEEDGYQRF CCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFYFTRESAIYANMKAFLVNRV HHHHHHHHHHHHHHHHCCCCEEEHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC GDFGFLLGIGLLLAFAGSMNYGEVFAKRAELASLHFPGTDWGLLTVACICLFIGAMGKSA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC QFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVSRMSPLFELSDTALSFITVIGAITA CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LFMGFLGIVQNDIKRVVAYSTLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLGAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH VIMGMHHDQDMRNMGGLRKYMPITWITSLVGSLALIGTPFFSGFYSKDSIIDAVKLSHLP HEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCC GSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPESPMGMAAAHGHDDHGHGHG CCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCCCCCCHHCCCCCCCCCCCC HDDHAHEPHETPWVVWVPLVLLAIPSVIIGAIAISPMLFGDFFQHGVAFDKVIFIGENHP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC ALAEMAEEFHGWVGMGLHSVSGLPVWLALAGVVVAWFLYLKRPELPASIRRAFGPIYTLL HHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DNKYYMDKINEVVFARGSVAIGRGLWKEGDVVVIDGLVNGSARFIGWFAGVIRFLQSGYI CCCHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCH YHYAFAMIIGMLGLLTLFVTLGGK HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]