Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 116690244

GI number: 116690244

Start: 2479202

End: 2479984

Strand: Reverse

Name: yaaA [C]

Synonym: Bcen2424_2223

Alternate gene names: 116690244

Gene position: 2479984-2479202 (Counterclockwise)

Preceding gene: 116690247

Following gene: 116690243

Centisome position: 71.18

GC content: 63.22

Gene sequence:

>783_bases
ATGATAATCGTTCTCTCTCCCGCCAAATCCCTCGACTACGAGACGCCCGCGCATGTCGAGTCTTACACGAAGCCTGCATT
CGTCGACGACGCGTCAGAGCTGATCGACGGCCTTCGCAAGCTGTCGCCGCAGGACATCGCCACGCTGATGGATATCTCCG
ATCCGCTCGCGCGCCTGAATTTCCAGCGCTACGCCGACTGGTCGCCGACCTTCACGCCGGCCAACGCGAAGCAGGCCGTG
CTGGCGTTCAACGGTGACGTCTACGAGGGGTTCGACGCGAAATCGCTGTCGTCCACCGATCTCGACTATGCGCAGCAGCA
CGTGCGCGTGCTGTCGGGCCTGTACGGGCTGCTGCGCCCGCTCGATCTGCTGCAGCCGTATCGGCTCGAGATGGGCACGC
GGTTCGCGAACGCGCGCGGCAAGGATCTGTATGCGTTCTGGGGCGACCGCATCACGCGGGCACTGAACGAGCAGCTCGAG
ACGCGCAGCGGCGCGGCGCGCGTGCTCGTCAACTGCGCGTCGACCGAATACTTCAAGTCGGTCAAGCCGAAGCTGCTGGC
CGCACCGGTCATCACGCCGGTATTCGAGGACTGGAAGGGCGGACGCTACAAGATCATCAGCTTCCATGCGAAACGCGCGC
GTGGCCTGATGGCGCGTTTTGTCGTCGAGAACCGGATCACCGACCCGAATGCGCTGAAGGAATTCGCGACGGAAGGTTAT
GCGTTCGATGCGGCTGCGTCGAACGATTCGACTTACGTATATCGCCGGCGCGTCGGCGAGTGA

Upstream 100 bases:

>100_bases
GCACGACGCGGTGTGCGGCATGCGGGGCGAGAGAGCGGGTCATTCGTTACAATCGGTGGTTTTCGTCTGACCGCAAGGCA
CGGCGTGCCAGCGAGCCTCT

Downstream 100 bases:

>100_bases
CCCTGCCGGCCGTTCACGAGACGGCCGGCGCTTATGAGGCCGGACAGGCGGTACATCGTCTGCTTCGGTCGCGAGCTTTG
CATGAGACCAGTGTAAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIIVLSPAKSLDYETPAHVESYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLNFQRYADWSPTFTPANAKQAV
LAFNGDVYEGFDAKSLSSTDLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFANARGKDLYAFWGDRITRALNEQLE
TRSGAARVLVNCASTEYFKSVKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFVVENRITDPNALKEFATEGY
AFDAAASNDSTYVYRRRVGE

Sequences:

>Translated_260_residues
MIIVLSPAKSLDYETPAHVESYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLNFQRYADWSPTFTPANAKQAV
LAFNGDVYEGFDAKSLSSTDLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFANARGKDLYAFWGDRITRALNEQLE
TRSGAARVLVNCASTEYFKSVKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFVVENRITDPNALKEFATEGY
AFDAAASNDSTYVYRRRVGE
>Mature_260_residues
MIIVLSPAKSLDYETPAHVESYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLNFQRYADWSPTFTPANAKQAV
LAFNGDVYEGFDAKSLSSTDLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFANARGKDLYAFWGDRITRALNEQLE
TRSGAARVLVNCASTEYFKSVKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFVVENRITDPNALKEFATEGY
AFDAAASNDSTYVYRRRVGE

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=256, Percent_Identity=58.203125, Blast_Score=316, Evalue=8e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1611_BURCA (Q1BV39)

Other databases:

- EMBL:   CP000378
- RefSeq:   YP_621489.1
- STRING:   Q1BV39
- GeneID:   4093721
- GenomeReviews:   CP000378_GR
- KEGG:   bcn:Bcen_1611
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- BioCyc:   BCEN331271:BCEN_1611-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29163; Mature: 29163

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVLSPAKSLDYETPAHVESYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLN
CEEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
FQRYADWSPTFTPANAKQAVLAFNGDVYEGFDAKSLSSTDLDYAQQHVRVLSGLYGLLRP
HHHCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFANARGKDLYAFWGDRITRALNEQLETRSGAARVLVNCASTEYFKS
HHHHCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHH
VKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFVVENRITDPNALKEFATEGY
CCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
AFDAAASNDSTYVYRRRVGE
EEECCCCCCCEEEHHCCCCC
>Mature Secondary Structure
MIIVLSPAKSLDYETPAHVESYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLN
CEEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
FQRYADWSPTFTPANAKQAVLAFNGDVYEGFDAKSLSSTDLDYAQQHVRVLSGLYGLLRP
HHHCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFANARGKDLYAFWGDRITRALNEQLETRSGAARVLVNCASTEYFKS
HHHHCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHH
VKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFVVENRITDPNALKEFATEGY
CCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
AFDAAASNDSTYVYRRRVGE
EEECCCCCCCEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA