Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690243

Identifier: 116690243

GI number: 116690243

Start: 2477863

End: 2479017

Strand: Reverse

Name: 116690243

Synonym: Bcen2424_2222

Alternate gene names: NA

Gene position: 2479017-2477863 (Counterclockwise)

Preceding gene: 116690244

Following gene: 116690238

Centisome position: 71.16

GC content: 63.9

Gene sequence:

>1155_bases
ATGGCCCTTTCGATCACCAGTAATTTCGACGCAGGCGCAATCGACGTCGTGTCGTGCGACAGCCCCGACGCAATCCGGCT
GCGCGTGCGCGGCGACAATCGTTCGGAGTTCGCGCAATGGTTTTACTACCGCTTGACGGGTGCACGCGGCGAGCGATGCG
TGATGACGTTCGAGAACGCAGCCGAATGCGCGTATCCGTCGGGTTGGCGCAACTACCACGCGGTGGCGAGCTACGACCGG
GTCGACTGGTTCCGCGTACCGACGACGTTCGACGGCAAGACGATGACCATCGACCATACGCCGGAGTTCGACAGCATCTA
CTACGCGTATTTCGAACCGTACTCGGAAGAGCGTCACGCGGCGTTTCTCGGTGCGGTCCAGCAGTTGCCGCAGGCGAGCG
TCGTCGAGCTCGGCCGTACGGTCGAAGGCCGTCCGATGTCGCTGCTGACGCTCGGCACGCCGGAAACCGATGGTGCGCCG
AAGAAGAAGGTGTGGATCATCGCGCGTCAGCATCCGGGCGAATCGATGGCCGAGTGGTTCGTCGAAGGCCTGGTCAAGCG
GCTGGCCGGATGGGGCGACTGGGCTGGCGATCCGGTTGCGCGCAAGCTCTACGATCGCGCGACGTTCTACATCGTCCCGA
ACATGAACCCGGACGGCAGCGTGCACGGTAACCTGCGCACCAATGCGGCCGGCGCGAACCTGAACCGCGAGTGGATGGCA
CCCGATGCCGAGCGCAGCCCCGAAGTGCTGGCCGTGCGCGATGCGATCCACGCGATCGGTTGCGACATGTTCTTCGACAT
TCACGGCGACGAGGATCTGCCGTACGTGTTCGTCGCCGGCTCGGAGATGCTGCCAAGCTTTACCGAGCAGCAGGGCAAGG
AGCAGGCTGCGTTCATCGACGCGTTCAAGGTCGCAAGCCCCGACTTCCAGACCGAGCATGGCTACGCGGCGAGCAAGTAC
AAGGAAGATGCGCTGAAGCTCGCGTCGAAGTACATCGGCCACCAGTTCGGCTGTCTGTCGTTGACGCTCGAAATGCCGTT
CAAGGACAACGCCAACCTGCCCGACGAGCGCGTCGGCTGGAACGGCGAGCGCAGCGCGGCGCTCGGCGCGGCGATGCTCG
CCGCGATCCTGGTGCACATCGACACGTTCGGTTAA

Upstream 100 bases:

>100_bases
AGACCAGTGTAAGCGCCAAAGCGCTAACACCAGTCGACAGCTTTGCATGGGACCGGAGTAAGCGCTAAAGCGCTAACTCC
GGTCGACAAAGGAGAGATAG

Downstream 100 bases:

>100_bases
GCACGGCCGTCGTCGCATGAAAAAAGCCGACGCATCTTGCGATGCGTCGGCTTTTTTGCTGCTGTCGTTGCCGCTCCGTC
GTATCAGGACTTCTTCGCGG

Product: peptidase M14, carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MALSITSNFDAGAIDVVSCDSPDAIRLRVRGDNRSEFAQWFYYRLTGARGERCVMTFENAAECAYPSGWRNYHAVASYDR
VDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHAAFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGAP
KKKVWIIARQHPGESMAEWFVEGLVKRLAGWGDWAGDPVARKLYDRATFYIVPNMNPDGSVHGNLRTNAAGANLNREWMA
PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQAAFIDAFKVASPDFQTEHGYAASKY
KEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGWNGERSAALGAAMLAAILVHIDTFG

Sequences:

>Translated_384_residues
MALSITSNFDAGAIDVVSCDSPDAIRLRVRGDNRSEFAQWFYYRLTGARGERCVMTFENAAECAYPSGWRNYHAVASYDR
VDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHAAFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGAP
KKKVWIIARQHPGESMAEWFVEGLVKRLAGWGDWAGDPVARKLYDRATFYIVPNMNPDGSVHGNLRTNAAGANLNREWMA
PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQAAFIDAFKVASPDFQTEHGYAASKY
KEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGWNGERSAALGAAMLAAILVHIDTFG
>Mature_383_residues
ALSITSNFDAGAIDVVSCDSPDAIRLRVRGDNRSEFAQWFYYRLTGARGERCVMTFENAAECAYPSGWRNYHAVASYDRV
DWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHAAFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGAPK
KKVWIIARQHPGESMAEWFVEGLVKRLAGWGDWAGDPVARKLYDRATFYIVPNMNPDGSVHGNLRTNAAGANLNREWMAP
DAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQAAFIDAFKVASPDFQTEHGYAASKYK
EDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGWNGERSAALGAAMLAAILVHIDTFG

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190194403, Length=371, Percent_Identity=26.1455525606469, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI120444924, Length=311, Percent_Identity=26.0450160771704, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI222352158, Length=318, Percent_Identity=25.1572327044025, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI31657119, Length=312, Percent_Identity=26.9230769230769, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI170763513, Length=333, Percent_Identity=24.9249249249249, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI115533904, Length=370, Percent_Identity=24.8648648648649, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI193202888, Length=191, Percent_Identity=30.3664921465969, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI28571179, Length=323, Percent_Identity=26.625386996904, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24641847, Length=322, Percent_Identity=26.7080745341615, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI161077807, Length=323, Percent_Identity=26.625386996904, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24641845, Length=323, Percent_Identity=26.625386996904, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 42712; Mature: 42581

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSITSNFDAGAIDVVSCDSPDAIRLRVRGDNRSEFAQWFYYRLTGARGERCVMTFENA
CEEEEECCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHEEEECCCCCEEEEEECCC
AECAYPSGWRNYHAVASYDRVDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHA
CCCCCCCCCCCCCEEECCCCCEEEECCCEECCCEEEECCCCCCCCEEEEEECCCCCCHHH
AFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGAPKKKVWIIARQHPGESMAEWF
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH
VEGLVKRLAGWGDWAGDPVARKLYDRATFYIVPNMNPDGSVHGNLRTNAAGANLNREWMA
HHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCEECCEEECCCCCCCCCCCCC
PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQAAFID
CCCCCCCCEEEHHHHHHHHCCEEEEEECCCCCCCEEEEECCHHCCCHHHHCCCHHHHHHH
AFKVASPDFQTEHGYAASKYKEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGW
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCC
NGERSAALGAAMLAAILVHIDTFG
CCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALSITSNFDAGAIDVVSCDSPDAIRLRVRGDNRSEFAQWFYYRLTGARGERCVMTFENA
EEEEECCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHEEEECCCCCEEEEEECCC
AECAYPSGWRNYHAVASYDRVDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHA
CCCCCCCCCCCCCEEECCCCCEEEECCCEECCCEEEECCCCCCCCEEEEEECCCCCCHHH
AFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGAPKKKVWIIARQHPGESMAEWF
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH
VEGLVKRLAGWGDWAGDPVARKLYDRATFYIVPNMNPDGSVHGNLRTNAAGANLNREWMA
HHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCEECCEEECCCCCCCCCCCCC
PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQAAFID
CCCCCCCCEEEHHHHHHHHCCEEEEEECCCCCCCEEEEECCHHCCCHHHHCCCHHHHHHH
AFKVASPDFQTEHGYAASKYKEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGW
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCC
NGERSAALGAAMLAAILVHIDTFG
CCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8320209 [H]