| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690241
Identifier: 116690241
GI number: 116690241
Start: 2476309
End: 2476983
Strand: Direct
Name: 116690241
Synonym: Bcen2424_2220
Alternate gene names: NA
Gene position: 2476309-2476983 (Clockwise)
Preceding gene: 116690240
Following gene: 116690242
Centisome position: 71.08
GC content: 67.7
Gene sequence:
>675_bases ATGGGTTTTCTTTTCACACCGCTTCCGCTCTGGGTTGGCATCGGTGGCTGGATCGCCGCCGTGGCCCTGCTCGCGCTCGC GATCTGGAATCGCCCGTTCGTACGTCTGCAAGACGCCACGCTTCAGCACGTGTGGCTCGCGCTCGTCACCGCGATCACGG TCCTGTGGGCCTCGAACGCATGGCTCGAGGATGGCATCGTCATGCATCTGCTTGGCGCCACCCTGCTCGTCACGCTGTTC GACTGGACACTCGCGCTGGTCGCGATGGGCGCCGTCACGGCGATTGCCGCGGTCATCTTTGACGCGCCGTGGCAAGGCAT CGGCCTGACCTATCTGATCTACGGTGCGCTGCCTGTCGGCGTGTCGGCGTTGCTGCAACGCGCCGCGCTCGCCTGGCTAC CGCATAACCTCGCCTCGTTCATCACCGGGCAGGGCTTCCTGTCGCCGGCCATCGCGATCGTCGCGGTCGCCGCCGCGGCG GCAGGTGTCCAGCTCGCACTCGCCGACGGCGTGCCCGTCGTGATTCCGGCCGGCTATCTGCTGAACACCGCACTGCTGGC GCTCGGCGAAGCATGGTTCACCGGCATGGCAACGGCACTCATCGCCGTCTATCGCCCCGCGTGGGTCACGACCTTCGACG TCCGGCGCTACCGCCTCGGCGGCCCGCGCGCCTGA
Upstream 100 bases:
>100_bases CCACGGTTCCGGCGCGGACGCTAGGCAAACAGTCTCGATATTGCGACGATCGGGCATGTGCAGATTCCCACCTTTGATGC TCAACGAGTAATATGGACGC
Downstream 100 bases:
>100_bases AAATCCCCCTGATCGGCTCGGCGCACACGCGTACCGGCGGTACTTCCGCGGCGCGCGCCGAATACGCCACCTACTGCTGC ACAACTTTTTTACGCTAAGA
Product: membrane protein-like protein
Products: NA
Alternate protein names: Cobalamin Biosynthesis Protein CbiM Homolog
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MGFLFTPLPLWVGIGGWIAAVALLALAIWNRPFVRLQDATLQHVWLALVTAITVLWASNAWLEDGIVMHLLGATLLVTLF DWTLALVAMGAVTAIAAVIFDAPWQGIGLTYLIYGALPVGVSALLQRAALAWLPHNLASFITGQGFLSPAIAIVAVAAAA AGVQLALADGVPVVIPAGYLLNTALLALGEAWFTGMATALIAVYRPAWVTTFDVRRYRLGGPRA
Sequences:
>Translated_224_residues MGFLFTPLPLWVGIGGWIAAVALLALAIWNRPFVRLQDATLQHVWLALVTAITVLWASNAWLEDGIVMHLLGATLLVTLF DWTLALVAMGAVTAIAAVIFDAPWQGIGLTYLIYGALPVGVSALLQRAALAWLPHNLASFITGQGFLSPAIAIVAVAAAA AGVQLALADGVPVVIPAGYLLNTALLALGEAWFTGMATALIAVYRPAWVTTFDVRRYRLGGPRA >Mature_223_residues GFLFTPLPLWVGIGGWIAAVALLALAIWNRPFVRLQDATLQHVWLALVTAITVLWASNAWLEDGIVMHLLGATLLVTLFD WTLALVAMGAVTAIAAVIFDAPWQGIGLTYLIYGALPVGVSALLQRAALAWLPHNLASFITGQGFLSPAIAIVAVAAAAA GVQLALADGVPVVIPAGYLLNTALLALGEAWFTGMATALIAVYRPAWVTTFDVRRYRLGGPRA
Specific function: Unknown
COG id: COG3235
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23649; Mature: 23518
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLFTPLPLWVGIGGWIAAVALLALAIWNRPFVRLQDATLQHVWLALVTAITVLWASNA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC WLEDGIVMHLLGATLLVTLFDWTLALVAMGAVTAIAAVIFDAPWQGIGLTYLIYGALPVG CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VSALLQRAALAWLPHNLASFITGQGFLSPAIAIVAVAAAAAGVQLALADGVPVVIPAGYL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHH LNTALLALGEAWFTGMATALIAVYRPAWVTTFDVRRYRLGGPRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCC >Mature Secondary Structure GFLFTPLPLWVGIGGWIAAVALLALAIWNRPFVRLQDATLQHVWLALVTAITVLWASNA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC WLEDGIVMHLLGATLLVTLFDWTLALVAMGAVTAIAAVIFDAPWQGIGLTYLIYGALPVG CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VSALLQRAALAWLPHNLASFITGQGFLSPAIAIVAVAAAAAGVQLALADGVPVVIPAGYL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHH LNTALLALGEAWFTGMATALIAVYRPAWVTTFDVRRYRLGGPRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA