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The map label for this gene is yhiR [C]

Identifier: 116690235

GI number: 116690235

Start: 2465825

End: 2466670

Strand: Direct

Name: yhiR [C]

Synonym: Bcen2424_2214

Alternate gene names: 116690235

Gene position: 2465825-2466670 (Clockwise)

Preceding gene: 116690234

Following gene: 116690239

Centisome position: 70.78

GC content: 61.23

Gene sequence:

>846_bases
ATGCTCAGTTATCGTCACGGTTTTCACGCAGGCAACCACGCGGACGTGCTCAAGCACGCCGTCGTCGTCCAGCTGCTGCG
CTACCTGAACAAGAAAGACAAATCGTACTGGTACATCGATACGCACGCAGGCGCCGGCGTGTACTCGCTGCGCGACGGTT
ATGCAGCGAAGACGTCGGAATTCGATACCGGCATCGGCCGACTGTGGAACGAAAAGAACCTGCCGGAGGCACTGGGCGAC
TATGTGGACGAAGTCCGCGCGCTGAACGACGACGGCGAACTGCATTTCTACCCGGGCTCCCCGTACATCGCATGGCGGTC
GATGCGCGAGCAGGACCGGATGCGCCTGTTCGAAATGCATACGACGGAAATCGATGTGCTGCGCCACAATTTCCGCGATG
CCGGGCGACGCGCGATGATCTTCGCCGGCGACGGCTTCGAAGGTATCAAGGCGCTGCTGCCGCCGCCGCCGCGACGTGCA
CTCGTGCTGATCGATCCGTCCTACGAGGACAAGAAGGATTACGCGCGCACGGCGAGCTGCGTGACGGAATGCCTGAAGCG
TTTCTCGACCGGCTGCTATGCCATCTGGTATCCGCAGGTCACGCGGACGGAATCACAGCGCTTTCCCGAGCAGTTGAAGC
GTCTGCAGCCGAACAACTGGCTGCACCTGACGCTGACGGTGTCGAATCCGCCGACCGACGGACTGGGTCTCTACGGCAGC
GGGATGTTCATCCTGAATCCGCCGTATACGCTCGCCCAGAGCATGAAAGAGGTCCTGCCCTATCTGGTCGAGAAGCTGGG
ACAGGATAGCGGCGCCCGCTTTCAAATCGAGCACCGCGGCAACTGA

Upstream 100 bases:

>100_bases
GCCACTCGCGTACAATACGCGGCCGCATCGGCGCCCGGCCTGACGGCCGCGCACGATCGACCGTTTTCATCGATTCACCT
TTCGTTTCAGGCAGCCAGCC

Downstream 100 bases:

>100_bases
TCGGGCGACTGGTCGTTACGGCTGCGGTCTCGGCGCGAGCCTGGGCTGGTTGGCCGGCTGCCCGCCCCACGCGGGAACAT
TGATATATGGCGCGACGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLSYRHGFHAGNHADVLKHAVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLRDGYAAKTSEFDTGIGRLWNEKNLPEALGD
YVDEVRALNDDGELHFYPGSPYIAWRSMREQDRMRLFEMHTTEIDVLRHNFRDAGRRAMIFAGDGFEGIKALLPPPPRRA
LVLIDPSYEDKKDYARTASCVTECLKRFSTGCYAIWYPQVTRTESQRFPEQLKRLQPNNWLHLTLTVSNPPTDGLGLYGS
GMFILNPPYTLAQSMKEVLPYLVEKLGQDSGARFQIEHRGN

Sequences:

>Translated_281_residues
MLSYRHGFHAGNHADVLKHAVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLRDGYAAKTSEFDTGIGRLWNEKNLPEALGD
YVDEVRALNDDGELHFYPGSPYIAWRSMREQDRMRLFEMHTTEIDVLRHNFRDAGRRAMIFAGDGFEGIKALLPPPPRRA
LVLIDPSYEDKKDYARTASCVTECLKRFSTGCYAIWYPQVTRTESQRFPEQLKRLQPNNWLHLTLTVSNPPTDGLGLYGS
GMFILNPPYTLAQSMKEVLPYLVEKLGQDSGARFQIEHRGN
>Mature_281_residues
MLSYRHGFHAGNHADVLKHAVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLRDGYAAKTSEFDTGIGRLWNEKNLPEALGD
YVDEVRALNDDGELHFYPGSPYIAWRSMREQDRMRLFEMHTTEIDVLRHNFRDAGRRAMIFAGDGFEGIKALLPPPPRRA
LVLIDPSYEDKKDYARTASCVTECLKRFSTGCYAIWYPQVTRTESQRFPEQLKRLQPNNWLHLTLTVSNPPTDGLGLYGS
GMFILNPPYTLAQSMKEVLPYLVEKLGQDSGARFQIEHRGN

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=266, Percent_Identity=46.6165413533835, Blast_Score=244, Evalue=5e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32206; Mature: 32206

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHGFHAGNHADVLKHAVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLRDGYAAKTSE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCCH
FDTGIGRLWNEKNLPEALGDYVDEVRALNDDGELHFYPGSPYIAWRSMREQDRMRLFEMH
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHC
TTEIDVLRHNFRDAGRRAMIFAGDGFEGIKALLPPPPRRALVLIDPSYEDKKDYARTASC
CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VTECLKRFSTGCYAIWYPQVTRTESQRFPEQLKRLQPNNWLHLTLTVSNPPTDGLGLYGS
HHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEC
GMFILNPPYTLAQSMKEVLPYLVEKLGQDSGARFQIEHRGN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHGFHAGNHADVLKHAVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLRDGYAAKTSE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCCH
FDTGIGRLWNEKNLPEALGDYVDEVRALNDDGELHFYPGSPYIAWRSMREQDRMRLFEMH
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHC
TTEIDVLRHNFRDAGRRAMIFAGDGFEGIKALLPPPPRRALVLIDPSYEDKKDYARTASC
CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VTECLKRFSTGCYAIWYPQVTRTESQRFPEQLKRLQPNNWLHLTLTVSNPPTDGLGLYGS
HHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEC
GMFILNPPYTLAQSMKEVLPYLVEKLGQDSGARFQIEHRGN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]