| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yghZ [H]
Identifier: 116690234
GI number: 116690234
Start: 2464742
End: 2465713
Strand: Direct
Name: yghZ [H]
Synonym: Bcen2424_2213
Alternate gene names: 116690234
Gene position: 2464742-2465713 (Clockwise)
Preceding gene: 116690232
Following gene: 116690235
Centisome position: 70.75
GC content: 63.89
Gene sequence:
>972_bases ATGCACTATCGACGGCTAGGCCGCTCCGGCCTGCAGATCAGCGAGCTTTCACTCGGTTCGTGGGTGACGTACGGCAACCA GGTCGACCAGCGGGTCGCGCGCGAATGCCTCGCCGCGGCACGTGATGCAGGCGTCAATTTCTTCGACAACGCCGAGGTCT ACGCCGGCGGCAAATCCGAGGAAATCATGGGCCATGCGCTTAAGTCGCTCGACTGGCCGCGCGTCAGTTATATCGTGTCC ACGAAGTTCTTCTGGGGGCTCGCAGAAGCCCCGAACCAGTATCACACGCTGAACCGGAAATACCTGCTGAACGCAATCGA CGGCTCGCTGCGCCGGCTACAGCTCGACTATGTCGACCTCGCCTATTGCCATCGCCCCGATCCGCATACGCCGATCGAGG AAACCGTCTGGGCGATGAGCGACATGATCGTGCGCGGCAAGGCGCTGTACTGGGGCACGTCGGAATGGAGCGCCGACGAA ATCCGCGCGGCATGCGAGATTGCCGAGCGGCATCATCTCCACAAGCCGGTCGTCGAACAACCGCAGTACAACCTGTTTCA CCGCACCCGGGTCGAACAGGAATATGCGCGGCTCTACGACGATTACGGTCTCGGGCTCACGACCTGGAGCCCGTTGGCGT CGGGCCTGCTCACCGGCAAGTACCGCAACGGCGTGCCGGCCGGCAGCCGCGCGCAGTTGCAAGGCTACGACTGGATGCGC GAACGCCTGACCGATCGGGCCGCCAACGACATCGTCGAACGGCTCGGCGAAATTGCGGCCGAATTCGGCTGCAGCACCGG CCAGTTGGCAATCGCGTGGGTGCTCGCGAACCCGCGCGTGAGTTCGGTCATCACGGGTGCATCGCGGGTCGACCAGATCG GCGACAACATGCGCGCGCTCGAGGTTGCCGCGAAGCTGACGCCGGACGTGAAGCAGCGCATCGAGGCGGTGGTCGGCGAT GCATACGAGTAA
Upstream 100 bases:
>100_bases ATCGCATCAGCGTGCCAGCCGTCATTGTGCACGATCGGCCCCGCCGTTCGTGCACAAAACGTCTAAGCTTAAGGTCGGTT CCGTTCAGCAGGAGAGTCTC
Downstream 100 bases:
>100_bases GGCGACTCACGGCCACTCGCGTACAATACGCGGCCGCATCGGCGCCCGGCCTGACGGCCGCGCACGATCGACCGTTTTCA TCGATTCACCTTTCGTTTCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHYRRLGRSGLQISELSLGSWVTYGNQVDQRVARECLAAARDAGVNFFDNAEVYAGGKSEEIMGHALKSLDWPRVSYIVS TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLAYCHRPDPHTPIEETVWAMSDMIVRGKALYWGTSEWSADE IRAACEIAERHHLHKPVVEQPQYNLFHRTRVEQEYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPAGSRAQLQGYDWMR ERLTDRAANDIVERLGEIAAEFGCSTGQLAIAWVLANPRVSSVITGASRVDQIGDNMRALEVAAKLTPDVKQRIEAVVGD AYE
Sequences:
>Translated_323_residues MHYRRLGRSGLQISELSLGSWVTYGNQVDQRVARECLAAARDAGVNFFDNAEVYAGGKSEEIMGHALKSLDWPRVSYIVS TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLAYCHRPDPHTPIEETVWAMSDMIVRGKALYWGTSEWSADE IRAACEIAERHHLHKPVVEQPQYNLFHRTRVEQEYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPAGSRAQLQGYDWMR ERLTDRAANDIVERLGEIAAEFGCSTGQLAIAWVLANPRVSSVITGASRVDQIGDNMRALEVAAKLTPDVKQRIEAVVGD AYE >Mature_323_residues MHYRRLGRSGLQISELSLGSWVTYGNQVDQRVARECLAAARDAGVNFFDNAEVYAGGKSEEIMGHALKSLDWPRVSYIVS TKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDLAYCHRPDPHTPIEETVWAMSDMIVRGKALYWGTSEWSADE IRAACEIAERHHLHKPVVEQPQYNLFHRTRVEQEYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPAGSRAQLQGYDWMR ERLTDRAANDIVERLGEIAAEFGCSTGQLAIAWVLANPRVSSVITGASRVDQIGDNMRALEVAAKLTPDVKQRIEAVVGD AYE
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=323, Percent_Identity=43.9628482972136, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=43.9252336448598, Blast_Score=298, Evalue=3e-81, Organism=Homo sapiens, GI27436964, Length=321, Percent_Identity=45.1713395638629, Blast_Score=298, Evalue=4e-81, Organism=Homo sapiens, GI27436962, Length=321, Percent_Identity=45.1713395638629, Blast_Score=296, Evalue=1e-80, Organism=Homo sapiens, GI27436966, Length=321, Percent_Identity=44.8598130841121, Blast_Score=295, Evalue=3e-80, Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=43.9628482972136, Blast_Score=284, Evalue=9e-77, Organism=Homo sapiens, GI41152114, Length=295, Percent_Identity=29.4915254237288, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI223718702, Length=291, Percent_Identity=26.8041237113402, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI41327764, Length=270, Percent_Identity=29.2592592592593, Blast_Score=82, Evalue=6e-16, Organism=Escherichia coli, GI1789375, Length=318, Percent_Identity=35.8490566037736, Blast_Score=178, Evalue=5e-46, Organism=Escherichia coli, GI87081735, Length=315, Percent_Identity=34.9206349206349, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1788070, Length=320, Percent_Identity=29.375, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=30.7471264367816, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788081, Length=303, Percent_Identity=25.4125412541254, Blast_Score=72, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=325, Percent_Identity=25.8461538461538, Blast_Score=108, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6323998, Length=330, Percent_Identity=26.969696969697, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=304, Percent_Identity=26.9736842105263, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319951, Length=335, Percent_Identity=26.2686567164179, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322615, Length=222, Percent_Identity=26.5765765765766, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640980, Length=340, Percent_Identity=31.1764705882353, Blast_Score=185, Evalue=3e-47, Organism=Drosophila melanogaster, GI45549126, Length=340, Percent_Identity=31.1764705882353, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24646155, Length=313, Percent_Identity=28.1150159744409, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24646159, Length=226, Percent_Identity=28.7610619469027, Blast_Score=85, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 36365; Mature: 36365
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYRRLGRSGLQISELSLGSWVTYGNQVDQRVARECLAAARDAGVNFFDNAEVYAGGKSE CCHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH EIMGHALKSLDWPRVSYIVSTKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDL HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHEEHHHHHH AYCHRPDPHTPIEETVWAMSDMIVRGKALYWGTSEWSADEIRAACEIAERHHLHKPVVEQ HHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHCC PQYNLFHRTRVEQEYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPAGSRAQLQGYDWMR CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH ERLTDRAANDIVERLGEIAAEFGCSTGQLAIAWVLANPRVSSVITGASRVDQIGDNMRAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHH EVAAKLTPDVKQRIEAVVGDAYE HHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MHYRRLGRSGLQISELSLGSWVTYGNQVDQRVARECLAAARDAGVNFFDNAEVYAGGKSE CCHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH EIMGHALKSLDWPRVSYIVSTKFFWGLAEAPNQYHTLNRKYLLNAIDGSLRRLQLDYVDL HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCHHHHEEHHHHHH AYCHRPDPHTPIEETVWAMSDMIVRGKALYWGTSEWSADEIRAACEIAERHHLHKPVVEQ HHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHCC PQYNLFHRTRVEQEYARLYDDYGLGLTTWSPLASGLLTGKYRNGVPAGSRAQLQGYDWMR CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH ERLTDRAANDIVERLGEIAAEFGCSTGQLAIAWVLANPRVSSVITGASRVDQIGDNMRAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHH EVAAKLTPDVKQRIEAVVGDAYE HHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]