| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690196
Identifier: 116690196
GI number: 116690196
Start: 2422776
End: 2423816
Strand: Reverse
Name: 116690196
Synonym: Bcen2424_2175
Alternate gene names: NA
Gene position: 2423816-2422776 (Counterclockwise)
Preceding gene: 116690199
Following gene: 116690195
Centisome position: 69.57
GC content: 71.76
Gene sequence:
>1041_bases ATGACGATTTCGAACGAGGAAAGCGACGCGGCGCAGGCCAGTCGCGCGGCGGGCGCGTTGCCGCCCGAACCCGTGACGCT GCGCGCAGCCGACGGTTACGAACTGCGCGGCCATGTCTGGCGCCATCGCGGCGGCGGCGCCGTGCGGCCCGTGACGGTCG TCAATTGCGCGACGTCGGTGCGCTGCGACTACTACTTTCGTTTCGCGGCCTGGCTGTTCGCGCAGGGGCGCGACGTGCTC GTCTACGACTATCGCGGCATCGGCGGGTCGCGTCCGGCGCGGCTTGCGAAGCTGAGCGCGAACTGGCTTGACTGGGGGCG GCTCGATTGCGAGGCCGCGCTGCACTACGCGCGCGACGCGTTTCCGGGCCAGCCGCTCGATGTGGTCGCGCACAGCATCG GCGGCTGCGTGCTCGGCCTCGCGGCATCGAACGTCCACGTGCGGCATGCGGTGACCGTCGGCGCGCAGTACGCGTACTGG CGCGACTATCTGCCGGCCGAGCGGCGCCGCATGTGGTGGAAGTGGCATGTCGCGATGCCGGCGCTCGCGGCCGTGTTCGG CTACGTGCCCGCGAAGCGGCTCGGCTGGATGGAGGACACGCCGCGCGGTATCGCGCTGTCGTGGGCGCGCTCGCAGCCGC GTTTCGAGGACGGCTACGTCGGTCGCGTGCTGGACGACAGCGGCGCGAGCCGCGCCGCGTTGCCGGCGCGCTTCGCGGGG CTGTCGGCGCCGATGCTCGCGGTCGGCATCGACGACGACGCGTTCGGCACGGTCGACGCGATCGAGCGGCTGGTCGGCTA CTACACGGGCAGCAACGTCACGCATCTGCGGATCGCGCCGGCCGACATCGGCGTCGACGCGATCGGTCATTTCGCGTTTT TCCACAGCCGCTTCACCGACACGTTGTGGCCCGTCGCGCTGTACTGGCTGCAACACGGCGTGTTGCCGGCCGATGCGCCG GGCGTCGTGCACGCGCTGCATCCGGCGTCGCGCGGGCGGGTGACGGGGAGCGGCGTGCCGGGCATCGCCGCGAACGGGTG A
Upstream 100 bases:
>100_bases TGGGGTCCAAGTAAGCGCTAAAGCGCCAACTCGGACCGACAGCGATGCATGGGACCCCAGTAAGCGCTAAAGCGCTAACT GGGGATCGACAGGAGACACG
Downstream 100 bases:
>100_bases TCGGGCCTACACGAACGCATCACGCAGTGCCCGTTCGACTCCCGATCGTGCCGCAACGGTCGCAGGCCGGCGCGATCGAT TACCATCGGACGTTTCGTTC
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Protein; Dehydrogenase
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTISNEESDAAQASRAAGALPPEPVTLRAADGYELRGHVWRHRGGGAVRPVTVVNCATSVRCDYYFRFAAWLFAQGRDVL VYDYRGIGGSRPARLAKLSANWLDWGRLDCEAALHYARDAFPGQPLDVVAHSIGGCVLGLAASNVHVRHAVTVGAQYAYW RDYLPAERRRMWWKWHVAMPALAAVFGYVPAKRLGWMEDTPRGIALSWARSQPRFEDGYVGRVLDDSGASRAALPARFAG LSAPMLAVGIDDDAFGTVDAIERLVGYYTGSNVTHLRIAPADIGVDAIGHFAFFHSRFTDTLWPVALYWLQHGVLPADAP GVVHALHPASRGRVTGSGVPGIAANG
Sequences:
>Translated_346_residues MTISNEESDAAQASRAAGALPPEPVTLRAADGYELRGHVWRHRGGGAVRPVTVVNCATSVRCDYYFRFAAWLFAQGRDVL VYDYRGIGGSRPARLAKLSANWLDWGRLDCEAALHYARDAFPGQPLDVVAHSIGGCVLGLAASNVHVRHAVTVGAQYAYW RDYLPAERRRMWWKWHVAMPALAAVFGYVPAKRLGWMEDTPRGIALSWARSQPRFEDGYVGRVLDDSGASRAALPARFAG LSAPMLAVGIDDDAFGTVDAIERLVGYYTGSNVTHLRIAPADIGVDAIGHFAFFHSRFTDTLWPVALYWLQHGVLPADAP GVVHALHPASRGRVTGSGVPGIAANG >Mature_345_residues TISNEESDAAQASRAAGALPPEPVTLRAADGYELRGHVWRHRGGGAVRPVTVVNCATSVRCDYYFRFAAWLFAQGRDVLV YDYRGIGGSRPARLAKLSANWLDWGRLDCEAALHYARDAFPGQPLDVVAHSIGGCVLGLAASNVHVRHAVTVGAQYAYWR DYLPAERRRMWWKWHVAMPALAAVFGYVPAKRLGWMEDTPRGIALSWARSQPRFEDGYVGRVLDDSGASRAALPARFAGL SAPMLAVGIDDDAFGTVDAIERLVGYYTGSNVTHLRIAPADIGVDAIGHFAFFHSRFTDTLWPVALYWLQHGVLPADAPG VVHALHPASRGRVTGSGVPGIAANG
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37529; Mature: 37398
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISNEESDAAQASRAAGALPPEPVTLRAADGYELRGHVWRHRGGGAVRPVTVVNCATSV CCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEECCEEEEECCCCCCCCEEEEECCCCC RCDYYFRFAAWLFAQGRDVLVYDYRGIGGSRPARLAKLSANWLDWGRLDCEAALHYARDA CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHC FPGQPLDVVAHSIGGCVLGLAASNVHVRHAVTVGAQYAYWRDYLPAERRRMWWKWHVAMP CCCCHHHHHHHHHCCEEEEEECCCEEEEEEEEECCCHHHHHHCCCHHHHHEEEEEEHHHH ALAAVFGYVPAKRLGWMEDTPRGIALSWARSQPRFEDGYVGRVLDDSGASRAALPARFAG HHHHHHHCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCC LSAPMLAVGIDDDAFGTVDAIERLVGYYTGSNVTHLRIAPADIGVDAIGHFAFFHSRFTD CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH TLWPVALYWLQHGVLPADAPGVVHALHPASRGRVTGSGVPGIAANG HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCC >Mature Secondary Structure TISNEESDAAQASRAAGALPPEPVTLRAADGYELRGHVWRHRGGGAVRPVTVVNCATSV CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEECCEEEEECCCCCCCCEEEEECCCCC RCDYYFRFAAWLFAQGRDVLVYDYRGIGGSRPARLAKLSANWLDWGRLDCEAALHYARDA CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHC FPGQPLDVVAHSIGGCVLGLAASNVHVRHAVTVGAQYAYWRDYLPAERRRMWWKWHVAMP CCCCHHHHHHHHHCCEEEEEECCCEEEEEEEEECCCHHHHHHCCCHHHHHEEEEEEHHHH ALAAVFGYVPAKRLGWMEDTPRGIALSWARSQPRFEDGYVGRVLDDSGASRAALPARFAG HHHHHHHCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCC LSAPMLAVGIDDDAFGTVDAIERLVGYYTGSNVTHLRIAPADIGVDAIGHFAFFHSRFTD CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH TLWPVALYWLQHGVLPADAPGVVHALHPASRGRVTGSGVPGIAANG HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA