| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yfhJ [C]
Identifier: 116690141
GI number: 116690141
Start: 2354226
End: 2354435
Strand: Reverse
Name: yfhJ [C]
Synonym: Bcen2424_2120
Alternate gene names: 116690141
Gene position: 2354435-2354226 (Counterclockwise)
Preceding gene: 116690142
Following gene: 116690135
Centisome position: 67.58
GC content: 59.52
Gene sequence:
>210_bases ATGAAATGGACCGATTCGCGTGAAATAGCCATTGCGCTGGCGGACAAGCACCCCGACATCGACCCGCAGCGGATCAACTT CGTCGACCTGCGCCAGTGGGTGCTCGAGCTCGACGGCTTCGACGACGATCCGACGCATTCCGGCGAGAAGATCCTCGAGG CGATCCAGGCACACTGGATCGACGAATCGGATTTTGACGACGAGGACTGA
Upstream 100 bases:
>100_bases CAGGCGATCGTGAAGGAAGATTCGGACCTGGTGGTCGAGATCCCGAAGTACTCGATCAACCACGCGAAGGAAAACCACTG ACAGGAACCGGAGGCAGGCG
Downstream 100 bases:
>100_bases TCGACCCGACCCGAACGGCCACGGCGTGCGCTGCAACGGTGCACGCCGCGTCAATGAAAAACGGCTCGTGAGCGCTTGCT CGCGAGCCGTTTTCGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MKWTDSREIAIALADKHPDIDPQRINFVDLRQWVLELDGFDDDPTHSGEKILEAIQAHWIDESDFDDED
Sequences:
>Translated_69_residues MKWTDSREIAIALADKHPDIDPQRINFVDLRQWVLELDGFDDDPTHSGEKILEAIQAHWIDESDFDDED >Mature_69_residues MKWTDSREIAIALADKHPDIDPQRINFVDLRQWVLELDGFDDDPTHSGEKILEAIQAHWIDESDFDDED
Specific function: Unknown
COG id: COG2975
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfhJ [H]
Homologues:
Organism=Escherichia coli, GI1788873, Length=64, Percent_Identity=56.25, Blast_Score=79, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007479 [H]
Pfam domain/function: PF04384 DUF528 [H]
EC number: NA
Molecular weight: Translated: 8079; Mature: 8079
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWTDSREIAIALADKHPDIDPQRINFVDLRQWVLELDGFDDDPTHSGEKILEAIQAHWI CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC DESDFDDED CCCCCCCCC >Mature Secondary Structure MKWTDSREIAIALADKHPDIDPQRINFVDLRQWVLELDGFDDDPTHSGEKILEAIQAHWI CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC DESDFDDED CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809750; 10984043 [H]