| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690126
Identifier: 116690126
GI number: 116690126
Start: 2335655
End: 2336020
Strand: Direct
Name: 116690126
Synonym: Bcen2424_2105
Alternate gene names: NA
Gene position: 2335655-2336020 (Clockwise)
Preceding gene: 116690125
Following gene: 116690136
Centisome position: 67.04
GC content: 71.04
Gene sequence:
>366_bases ATGAATCGCCCTCACCCCTTGCTCACCATCCGCAGCGTCGTCCTGACGGGCATGGCCGCCGGCACGCTCGCGCTGGCCGG CTGCGCGATGCCACCGCCGACTTCCACGATCCTGAGCCGCCTGCCCGAACCGGGCGCGTCGGGCGGCCAGCCGCCCGTGT TGTCGAGCGCCGAACGCAAGCGCTACGACGAGATCGACCAGCAGGTGCTGCGCGAACAGAACAGCGCGATGGCAGCCGAG GCGGCGGCGCGCGCGTGGGCGTATTACTCGCCGCCGCCCGTGACGGTCTATGGCGGGTACTACGGCGGATGGGGCAATCG TTGGGGCACGGGCGTCAGCTACGGCTACCCGGGCTGGTGGTGGTGA
Upstream 100 bases:
>100_bases GCATAATGACGCACGAGCGCCGCACCGCGGCTCAGGCGCCCAAGGCCCGGCCTTCGGCGCAAGCCGCTTTCCCACGGTCG GCGCGCCGCAGGAGAAACAC
Downstream 100 bases:
>100_bases GCGGGCGTCGCCCGATCGATTGACGACTGGCAGGAAATAAAAAAGCGCGGCATTTCCCGCGCTTTTTCAATGGATTCGAC GTACCGCGCTCAGTGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MNRPHPLLTIRSVVLTGMAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPVLSSAERKRYDEIDQQVLREQNSAMAAE AAARAWAYYSPPPVTVYGGYYGGWGNRWGTGVSYGYPGWWW
Sequences:
>Translated_121_residues MNRPHPLLTIRSVVLTGMAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPVLSSAERKRYDEIDQQVLREQNSAMAAE AAARAWAYYSPPPVTVYGGYYGGWGNRWGTGVSYGYPGWWW >Mature_121_residues MNRPHPLLTIRSVVLTGMAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPVLSSAERKRYDEIDQQVLREQNSAMAAE AAARAWAYYSPPPVTVYGGYYGGWGNRWGTGVSYGYPGWWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13042; Mature: 13042
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPHPLLTIRSVVLTGMAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPVLSSAERK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHH RYDEIDQQVLREQNSAMAAEAAARAWAYYSPPPVTVYGGYYGGWGNRWGTGVSYGYPGWW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC W C >Mature Secondary Structure MNRPHPLLTIRSVVLTGMAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPVLSSAERK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHH RYDEIDQQVLREQNSAMAAEAAARAWAYYSPPPVTVYGGYYGGWGNRWGTGVSYGYPGWW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC W C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA