| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hslO [H]
Identifier: 116690125
GI number: 116690125
Start: 2334567
End: 2335517
Strand: Direct
Name: hslO [H]
Synonym: Bcen2424_2104
Alternate gene names: 116690125
Gene position: 2334567-2335517 (Clockwise)
Preceding gene: 116690124
Following gene: 116690126
Centisome position: 67.01
GC content: 66.14
Gene sequence:
>951_bases GTGAGCGACCAGTTACAGAAATTCATGTTCAATGCGGCGCCCGTGCGCGGCGAGATCGTTTCGCTGCGCAACACGTGGCA GGAAGTGCTCGCCCGCCGCGACTACCCTGCCCCGGTGCGCACGGTGCTCGGCGAGATGATGGCCGCGTGCGCGCTGCTGT CCGCGAACCTGAAATTTCACGGCACCCTGATCATGCAGATCTTCGGCGACGGGCCGGTCCAGATGCTGGTCGTCCAGTGC GGGTCCGATCTGTCGATGCGGGCCACCGCGAAGTTCTCGGGCGACGCCGCGCAGACGATCAGCGACGACACGAGTTTCGC GGCGCTCGTCAATGCAAGCGGCCACGGCCGCTGCGTGATCACGCTCGATCCGGCCGACAAGCTGCCGGGCCAGCAGCCGT ATCAAGGCATCGTGCCGCTGAACGGCGTCGACGGCCCGCTCGAATCGGTGTCGCAGGTGCTCGAGCACTACATGCATCAC TCGGAGCAGCTCGACACGCGGCTGTGGCTCGCGGCCGATCGCGACCGCGCGGTCGGCATGCTGCTGCAGAAGCTGCCGGG CGACGGCGGCATCGTGCCGCGCAACGCCGAAACCGATATCGACACGTGGGAGCGCGTGTGCACGCTCGGCGGCACGCTGT CCGCGAAGGAACTGCTCGAAGTCGAACCGGAAGTCGTGTTCCGCCGGCTGTTCTGGCAGGAAAACGTGCAGCACTTCGAA CCGGCCGGCACGCGCTTCCAGTGTTCGTGCTCGCGCGAGAAGGTCGGTGCGATGCTGCGCATGCTCGGTCGTGAAGAAGT CGACAGCGTGATCGTCGAGCGCGGCCACGTCGAGATCCACTGCGAGTTCTGCAACCAGCGCTACGAATTCGATCCGGTCG ACGTCGCGCAACTGTTTGCGGCACCCGGTGTCGAAACCGGCATCGCGCCCGCGACCGACCAGCGTCACTGA
Upstream 100 bases:
>100_bases CGGCTGCGCGCGAACGCGAAGACGTATGTCGAGCGACGCGCGCATTTCAAGGAGCAACTCGTGCGGATCGGGTGATTCGC ACGGATTTCAAGGAAGAAGA
Downstream 100 bases:
>100_bases GCCATGCGCCCGTGCCCGCCACCGGCGCGGCACGGGCGCATAATGACGCACGAGCGCCGCACCGCGGCTCAGGCGCCCAA GGCCCGGCCTTCGGCGCAAG
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSDQLQKFMFNAAPVRGEIVSLRNTWQEVLARRDYPAPVRTVLGEMMAACALLSANLKFHGTLIMQIFGDGPVQMLVVQC GSDLSMRATAKFSGDAAQTISDDTSFAALVNASGHGRCVITLDPADKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHH SEQLDTRLWLAADRDRAVGMLLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE PAGTRFQCSCSREKVGAMLRMLGREEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFAAPGVETGIAPATDQRH
Sequences:
>Translated_316_residues MSDQLQKFMFNAAPVRGEIVSLRNTWQEVLARRDYPAPVRTVLGEMMAACALLSANLKFHGTLIMQIFGDGPVQMLVVQC GSDLSMRATAKFSGDAAQTISDDTSFAALVNASGHGRCVITLDPADKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHH SEQLDTRLWLAADRDRAVGMLLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE PAGTRFQCSCSREKVGAMLRMLGREEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFAAPGVETGIAPATDQRH >Mature_315_residues SDQLQKFMFNAAPVRGEIVSLRNTWQEVLARRDYPAPVRTVLGEMMAACALLSANLKFHGTLIMQIFGDGPVQMLVVQCG SDLSMRATAKFSGDAAQTISDDTSFAALVNASGHGRCVITLDPADKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHHS EQLDTRLWLAADRDRAVGMLLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFEP AGTRFQCSCSREKVGAMLRMLGREEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFAAPGVETGIAPATDQRH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=318, Percent_Identity=35.5345911949685, Blast_Score=197, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 34893; Mature: 34762
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLQKFMFNAAPVRGEIVSLRNTWQEVLARRDYPAPVRTVLGEMMAACALLSANLKFH CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEC GTLIMQIFGDGPVQMLVVQCGSDLSMRATAKFSGDAAQTISDDTSFAALVNASGHGRCVI CEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCHHHHCCCCCCEEEEEECCCCCEEEE TLDPADKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHHSEQLDTRLWLAADRDRAVGM EECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHH LLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC PAGTRFQCSCSREKVGAMLRMLGREEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFA CCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH APGVETGIAPATDQRH CCCCCCCCCCCCCCCC >Mature Secondary Structure SDQLQKFMFNAAPVRGEIVSLRNTWQEVLARRDYPAPVRTVLGEMMAACALLSANLKFH CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEC GTLIMQIFGDGPVQMLVVQCGSDLSMRATAKFSGDAAQTISDDTSFAALVNASGHGRCVI CEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCHHHHCCCCCCEEEEEECCCCCEEEE TLDPADKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHHSEQLDTRLWLAADRDRAVGM EECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHH LLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC PAGTRFQCSCSREKVGAMLRMLGREEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFA CCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH APGVETGIAPATDQRH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]