| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is rimI [H]
Identifier: 116690065
GI number: 116690065
Start: 2268623
End: 2269123
Strand: Reverse
Name: rimI [H]
Synonym: Bcen2424_2044
Alternate gene names: 116690065
Gene position: 2269123-2268623 (Counterclockwise)
Preceding gene: 116690066
Following gene: 116690064
Centisome position: 65.13
GC content: 66.67
Gene sequence:
>501_bases ATGACAGGGGTCCTGCTGAGCGACCGCTATCTGGCGCCGATGACGGACGCCGACCTCGACGAAGTCGTCGCGATCGAGCA CGTCGCGTACGAATTTCCGTGGAGCCGCGGCAATTTCGAGGATTCGTTGCGCAACGGCTATCTGGGCGTGTGCCTGCGGC ACGTGACGGGGTCGCTCGTCGGCTATTGCGTGCTGATGCCCGTGGTCGACGAGATGCATCTGCTGAACCTGTGCGTCGCG CCGGCCGCGCAGCATGCGGGCGCCGGCCTCGCGCTGCTGCGCGAGGCGGTGCGCATTTCTCGCGCGGAGGGGCTCGACGG CGTGCTGCTCGAAGTGCGGCCGTCCAATCCGCGCGCGATTCATCTGTACGAGCGCTTCGGCTTCGTGACGATCGGCCGGC GCAAGAACTACTATCCGGCGAAGCATCGCAGCCGGGAGGACGCGATCGTGATGCGTCTGACGCTGAACAAGGACGAGGGG GACGCGCATGGCGTGGGGTGA
Upstream 100 bases:
>100_bases CGGCCGATCAGGCCGCGCCCGAATACGTGCGTGACAAGGTCGCGCAGACCACCGCCGAGCGCATCGCGGCACGGGCCGCG CAGACGGGCGGAGCGAAGGG
Downstream 100 bases:
>100_bases AGCGGCGCTCGAGGAACTCGGCCTCGCGCAGATCTGGGTGCGGCGCGGGCAGCGCGCGGACGAAGGGGCGGCAGCCGATG CGCCTGCCGTCGCGCAAACC
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTGVLLSDRYLAPMTDADLDEVVAIEHVAYEFPWSRGNFEDSLRNGYLGVCLRHVTGSLVGYCVLMPVVDEMHLLNLCVA PAAQHAGAGLALLREAVRISRAEGLDGVLLEVRPSNPRAIHLYERFGFVTIGRRKNYYPAKHRSREDAIVMRLTLNKDEG DAHGVG
Sequences:
>Translated_166_residues MTGVLLSDRYLAPMTDADLDEVVAIEHVAYEFPWSRGNFEDSLRNGYLGVCLRHVTGSLVGYCVLMPVVDEMHLLNLCVA PAAQHAGAGLALLREAVRISRAEGLDGVLLEVRPSNPRAIHLYERFGFVTIGRRKNYYPAKHRSREDAIVMRLTLNKDEG DAHGVG >Mature_165_residues TGVLLSDRYLAPMTDADLDEVVAIEHVAYEFPWSRGNFEDSLRNGYLGVCLRHVTGSLVGYCVLMPVVDEMHLLNLCVAP AAQHAGAGLALLREAVRISRAEGLDGVLLEVRPSNPRAIHLYERFGFVTIGRRKNYYPAKHRSREDAIVMRLTLNKDEGD AHGVG
Specific function: This enzyme acetylates the N-terminal alanine of a ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=146, Percent_Identity=36.3013698630137, Blast_Score=89, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 18387; Mature: 18256
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVLLSDRYLAPMTDADLDEVVAIEHVAYEFPWSRGNFEDSLRNGYLGVCLRHVTGSLV CCCEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHHHHHH GYCVLMPVVDEMHLLNLCVAPAAQHAGAGLALLREAVRISRAEGLDGVLLEVRPSNPRAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEE HLYERFGFVTIGRRKNYYPAKHRSREDAIVMRLTLNKDEGDAHGVG EEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure TGVLLSDRYLAPMTDADLDEVVAIEHVAYEFPWSRGNFEDSLRNGYLGVCLRHVTGSLV CCEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHHHHHH GYCVLMPVVDEMHLLNLCVAPAAQHAGAGLALLREAVRISRAEGLDGVLLEVRPSNPRAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEE HLYERFGFVTIGRRKNYYPAKHRSREDAIVMRLTLNKDEGDAHGVG EEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA