| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yeaZ [H]
Identifier: 116690066
GI number: 116690066
Start: 2269120
End: 2269887
Strand: Reverse
Name: yeaZ [H]
Synonym: Bcen2424_2045
Alternate gene names: 116690066
Gene position: 2269887-2269120 (Counterclockwise)
Preceding gene: 116690070
Following gene: 116690065
Centisome position: 65.15
GC content: 74.22
Gene sequence:
>768_bases ATGTCGGCCATGACGCAAACAGTGCTCCTCGCCATCGATACGTCGACCGAATACTGCTCGGTCGCGCTGCTGCGCTCGGC CTCGGCCGATGACGCCGTTTCCACCCCGCAAACCTGGGTCCGCCACGAGCCGACGGGCGCCGTGTCGAGCACGCGCGTGC TGCCGGCGATCCAGGAGCTCTTCGCCGAATCCGGGCTGACGCTCGCCGACTGCGATGCGATCGCGTTCGGCGCGGGCCCT GGCTCGTTCACGGGCCTGCGTACCGCGACGGGCATCACCCAGGGCCTCGCGTTCGGGGCCGGGCTGCCGGTCGTGCCGAT CGGCACGCTGCTCGCGTGCGCCGAGCATGCGCGGCTGCGCGCGCCCGGCACGACCCGCGTGCTCGCCGCGCTCGACGCGC GGATGGACGAAGCCTACTGGGCGGATTTCGAATGGGACGACGGCGCCGGTGACTGGCGTACGCTACATCCGGCGTCGCTC GACGCGCCGGGCGCCATCGGCGTACCCGATGCGCCGTTCACGCTCGCCGGCAATGCGGCCGCGGCGTTCGGCGCGCAGTT GCCGGCCGCCGCGCGGGCGGCCGCGATCGACGGCGAGGCGCTGCCGCATGCGCTGGCGGTCGCGCATGCCGCGCTGCGCG CGTTCCGCGCCGGGCGGGCGGTGCCGGCCGATCAGGCCGCGCCCGAATACGTGCGTGACAAGGTCGCGCAGACCACCGCC GAGCGCATCGCGGCACGGGCCGCGCAGACGGGCGGAGCGAAGGGATGA
Upstream 100 bases:
>100_bases CCGTCGCGCGGGGTCGAGCGATCCTTCCAAACCGCCGCCGGCGCCGCCCGCGCGCACAGATCGGGCCCGATCGCCCGTGG GAGCGGGGCGGCGCATTACA
Downstream 100 bases:
>100_bases CAGGGGTCCTGCTGAGCGACCGCTATCTGGCGCCGATGACGGACGCCGACCTCGACGAAGTCGTCGCGATCGAGCACGTC GCGTACGAATTTCCGTGGAG
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSAMTQTVLLAIDTSTEYCSVALLRSASADDAVSTPQTWVRHEPTGAVSSTRVLPAIQELFAESGLTLADCDAIAFGAGP GSFTGLRTATGITQGLAFGAGLPVVPIGTLLACAEHARLRAPGTTRVLAALDARMDEAYWADFEWDDGAGDWRTLHPASL DAPGAIGVPDAPFTLAGNAAAAFGAQLPAAARAAAIDGEALPHALAVAHAALRAFRAGRAVPADQAAPEYVRDKVAQTTA ERIAARAAQTGGAKG
Sequences:
>Translated_255_residues MSAMTQTVLLAIDTSTEYCSVALLRSASADDAVSTPQTWVRHEPTGAVSSTRVLPAIQELFAESGLTLADCDAIAFGAGP GSFTGLRTATGITQGLAFGAGLPVVPIGTLLACAEHARLRAPGTTRVLAALDARMDEAYWADFEWDDGAGDWRTLHPASL DAPGAIGVPDAPFTLAGNAAAAFGAQLPAAARAAAIDGEALPHALAVAHAALRAFRAGRAVPADQAAPEYVRDKVAQTTA ERIAARAAQTGGAKG >Mature_254_residues SAMTQTVLLAIDTSTEYCSVALLRSASADDAVSTPQTWVRHEPTGAVSSTRVLPAIQELFAESGLTLADCDAIAFGAGPG SFTGLRTATGITQGLAFGAGLPVVPIGTLLACAEHARLRAPGTTRVLAALDARMDEAYWADFEWDDGAGDWRTLHPASLD APGAIGVPDAPFTLAGNAAAAFGAQLPAAARAAAIDGEALPHALAVAHAALRAFRAGRAVPADQAAPEYVRDKVAQTTAE RIAARAAQTGGAKG
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=234, Percent_Identity=37.6068376068376, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25927; Mature: 25796
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMTQTVLLAIDTSTEYCSVALLRSASADDAVSTPQTWVRHEPTGAVSSTRVLPAIQEL CCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH FAESGLTLADCDAIAFGAGPGSFTGLRTATGITQGLAFGAGLPVVPIGTLLACAEHARLR HHHCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC APGTTRVLAALDARMDEAYWADFEWDDGAGDWRTLHPASLDAPGAIGVPDAPFTLAGNAA CCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCHH AAFGAQLPAAARAAAIDGEALPHALAVAHAALRAFRAGRAVPADQAAPEYVRDKVAQTTA HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ERIAARAAQTGGAKG HHHHHHHHHCCCCCC >Mature Secondary Structure SAMTQTVLLAIDTSTEYCSVALLRSASADDAVSTPQTWVRHEPTGAVSSTRVLPAIQEL CCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH FAESGLTLADCDAIAFGAGPGSFTGLRTATGITQGLAFGAGLPVVPIGTLLACAEHARLR HHHCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC APGTTRVLAALDARMDEAYWADFEWDDGAGDWRTLHPASLDAPGAIGVPDAPFTLAGNAA CCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCHH AAFGAQLPAAARAAAIDGEALPHALAVAHAALRAFRAGRAVPADQAAPEYVRDKVAQTTA HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ERIAARAAQTGGAKG HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]