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The map label for this gene is alr [H]

Identifier: 116690060

GI number: 116690060

Start: 2263151

End: 2264221

Strand: Reverse

Name: alr [H]

Synonym: Bcen2424_2039

Alternate gene names: 116690060

Gene position: 2264221-2263151 (Counterclockwise)

Preceding gene: 116690063

Following gene: 116690059

Centisome position: 64.99

GC content: 68.35

Gene sequence:

>1071_bases
ATGCCGCGCCCGATCTCCGCCACCATCCACACCGCCGCTCTCGCGAACAATCTCTCCGTCGTCCGCCGCTTTGCCGGCCC
GTCCAAGGTCTGGGCGGTCGTCAAGGCCAACGCGTACGGCCACGGTCTCGCCCGCGCGTTTCCGGGCCTGCGCGGCACCG
ACGGCTTCGGCCTGCTCGACCTCGACGAGGCGGTGAAGCTGCGCGAGCTCGGCTGGGCCGGCCCGATCCTGCTGCTCGAA
GGCTTCTTCCGCTCGACCGACATCGACGTGATCGACCGCTACAGCCTGACCACGACCGTCCACAACGACGAGCAGATGCG
GATGCTGGAAACGGCGCGGCTGTCGAAGCCCGTTAACGTGCAGCTCAAGATGAACAGCGGGATGAACCGGCTCGGTTACG
TGCCGGAAAAATACCGTGCCGCGTGGGAGCGCGCCCGCGCGTGCCCCGGCATCGGCCAGATCACGTTGATGACCCATTTT
TCGGACGCGGACAACGAGCGCGGTGTCGCCGAGCAGCTCGCGACGTTCGAGCGCGGCGCGGAAAGCATCGCCGGCGCGCG
CAGTCTCGCGAATTCGGCCGCCGTGCTGTGGCATCCGGATACGCACTTCGACTGGGTGCGTCCGGGGATCGTGCTGTATG
GCGCGTCGCCGTCCGGGTTGTCGTCCGATATCGCGGACACGGGGTTGAAGTCCGCGATGACGCTTGCATCCGAGCTGATC
GCGGTGCAGACGATCGGGAAGGGCCAGGCGATCGGTTATGGTTCGACGTTTTCGGCGCAGGCGCCGATGCGGATCGGCGT
CGTCGCGTGCGGCTATGCGGATGGCTATCCGCGCGTGGCGCCCGAAGGCACGCCCGTGATCGTCGACGGCATCCGTACGC
GGATCGTCGGCCGCGTGTCGATGGACATGATCACCGTCGACCTGACGCCGTGCCCGCAGGCCGGCGTCGGCGCGCGCGTC
GAGCTGTGGGGCAACGCGCTGCCGATCGACGACGTCGCGCGCCATTGCGGCACGATCGGCTACGAGCTGATGTGCGCGGT
CGCGGCCCGCGTGCCCGTGCGAGCGGAATAA

Upstream 100 bases:

>100_bases
GGACTAGCAAGATTCCCCGATCGTTCCGCAAATTGTCGGCTTCGGTGCTCAAAAGGCGCGGTAAGCTGATGATTCGCAAG
CGTCTTTACGTAAATTTCCC

Downstream 100 bases:

>100_bases
GGGCGTCGCGCGTGGCCAAACAGAAAACCGTTTACGTCTGCAGCGAGTGCGGCGGACAGACCCCGAAGTGGCAGGGCCAG
TGCCCGTCGTGCCAAGCCTG

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MPRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDLDEAVKLRELGWAGPILLLE
GFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNVQLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHF
SDADNERGVAEQLATFERGAESIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKSAMTLASELI
AVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARV
ELWGNALPIDDVARHCGTIGYELMCAVAARVPVRAE

Sequences:

>Translated_356_residues
MPRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDLDEAVKLRELGWAGPILLLE
GFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNVQLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHF
SDADNERGVAEQLATFERGAESIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKSAMTLASELI
AVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARV
ELWGNALPIDDVARHCGTIGYELMCAVAARVPVRAE
>Mature_355_residues
PRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDLDEAVKLRELGWAGPILLLEG
FFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNVQLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHFS
DADNERGVAEQLATFERGAESIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKSAMTLASELIA
VQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVE
LWGNALPIDDVARHCGTIGYELMCAVAARVPVRAE

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1787439, Length=353, Percent_Identity=57.2237960339943, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1790487, Length=352, Percent_Identity=45.1704545454545, Blast_Score=295, Evalue=3e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 38103; Mature: 37972

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEE
LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECEEEEEEECCCHHHHHHHHHHCCCCCEE
QLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHFSDADNERGVAEQLATFERGA
EEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
ESIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKSAMTLASELI
HHHHHHHHHCCCCEEEECCCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
AVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVS
HHEECCCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHEEE
MDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCAVAARVPVRAE
EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEE
LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECEEEEEEECCCHHHHHHHHHHCCCCCEE
QLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHFSDADNERGVAEQLATFERGA
EEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
ESIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKSAMTLASELI
HHHHHHHHHCCCCEEEECCCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
AVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVS
HHEECCCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHEEE
MDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCAVAARVPVRAE
EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA