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The map label for this gene is radA [H]

Identifier: 116690059

GI number: 116690059

Start: 2261763

End: 2263139

Strand: Reverse

Name: radA [H]

Synonym: Bcen2424_2038

Alternate gene names: 116690059

Gene position: 2263139-2261763 (Counterclockwise)

Preceding gene: 116690060

Following gene: 116690058

Centisome position: 64.96

GC content: 69.06

Gene sequence:

>1377_bases
GTGGCCAAACAGAAAACCGTTTACGTCTGCAGCGAGTGCGGCGGACAGACCCCGAAGTGGCAGGGCCAGTGCCCGTCGTG
CCAAGCCTGGAACACGCTCGTCGAATCGGTCGCCGAGTCGCCGGCCGCCCATCGGTTCCAGTCGCTCGCGAAGCGGGCGC
CGGTGCAGCGGCTCGCCGACATCGAGGCCGCCGACGTGCCGCGCTTCTCCACCGGCATCGGCGAATTCGACCGCGTGCTG
GGCGGCGGGCTGGTGCCCGGCGGTGTCGTGCTGATCGGCGGCGATCCGGGCATCGGCAAGTCGACGCTGCTGCTGCAGTC
GCTCGCGGATATCGCGAACGAGAGGCGCGCCCTCTATATCAGCGGCGAGGAATCGGCCGCGCAGATCGCGTTGCGCGCGC
AACGGCTCGCGTTGCTCGACGGCGGTGCGCCGGCGGCCGAACTGAAGCTGCTCGCCGAGATCCAGCTCGAGAAGATCCAG
GCCGCGATCGATTCGGAGCGGCCGGACGTGGCCGTCATCGACTCGATCCAGACCGTCTATTCCGAGGCGCTGACGTCGGC
GCCGGGCTCGGTCGCGCAGGTGCGCGAGTGCGCGGCGCAGCTCACGCGCATCGCGAAACAGTCGGGCACCGCGATCATCA
TGGTCGGGCACGTGACGAAGGAGGGCAATCTGGCCGGCCCGCGCGTGCTCGAGCACATCGTCGACACGGTGCTGTATTTC
GAAGGCGACACGCATTCGTCGTTCCGGCTCGTGCGCGCGTTCAAGAACCGTTTCGGCGCGGTCAACGAGCTCGGCGTGTT
CGCAATGACCGAGCGCGGGCTGCGCGGCGTGGCCAACCCGTCCGCGCTGTTCCTGTCGCAGCACGAGCAGGTCGTGCCCG
GTTCGTGCGTGCTCGTCACGCAGGAAGGCACGCGCCCGCTGCTCGTCGAAATCCAGGCGCTCGTCGATACGGCGCACGTG
CCGAACCCGCGCCGGCTCGCGGTCGGCCTCGAGCAGAACCGGCTCGCGATGCTGCTCGCGGTGCTGCACCGCCACGCGGG
CATCGCAGCCTTCGACCAGGACGTGTTCCTCAATGCGGTGGGCGGCGTGAAGATCACCGAGCCGGCCGCCGACCTCGCGG
TGCTGCTCGCGATTCACTCGTCGATGCGCAACAAGGCGCTGCCGAAAGGGCTGATCGTGTTCGGCGAGGTGGGGCTGGCG
GGCGAGATCCGGCCGTCCCCGCGCGGGCAGGAACGGCTGCGCGAAGCGGCGAAGCTCGGTTTCACGTCCGCGCTGATTCC
GAAGGCGAATGCGCCGAAACAGCCGATCGAAGGGCTGAACGTGATGGCCGTCGAGCGGCTCGAGCAGGCGATCGACCGCG
TGCGCGATCTCGAATGA

Upstream 100 bases:

>100_bases
CGATCGACGACGTCGCGCGCCATTGCGGCACGATCGGCTACGAGCTGATGTGCGCGGTCGCGGCCCGCGTGCCCGTGCGA
GCGGAATAAGGGCGTCGCGC

Downstream 100 bases:

>100_bases
GCGGGCGGGGCCCTGGCAGGGGCCGTAGCGGGCCGGACGATCTGTCGCGTAATTCGCTGTAAAGAATATGTAGGCTGATG
TAACCCGCCGGACATCGCTT

Product: DNA repair protein RadA

Products: NA

Alternate protein names: DNA repair protein sms homolog [H]

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MAKQKTVYVCSECGGQTPKWQGQCPSCQAWNTLVESVAESPAAHRFQSLAKRAPVQRLADIEAADVPRFSTGIGEFDRVL
GGGLVPGGVVLIGGDPGIGKSTLLLQSLADIANERRALYISGEESAAQIALRAQRLALLDGGAPAAELKLLAEIQLEKIQ
AAIDSERPDVAVIDSIQTVYSEALTSAPGSVAQVRECAAQLTRIAKQSGTAIIMVGHVTKEGNLAGPRVLEHIVDTVLYF
EGDTHSSFRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQVVPGSCVLVTQEGTRPLLVEIQALVDTAHV
PNPRRLAVGLEQNRLAMLLAVLHRHAGIAAFDQDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKALPKGLIVFGEVGLA
GEIRPSPRGQERLREAAKLGFTSALIPKANAPKQPIEGLNVMAVERLEQAIDRVRDLE

Sequences:

>Translated_458_residues
MAKQKTVYVCSECGGQTPKWQGQCPSCQAWNTLVESVAESPAAHRFQSLAKRAPVQRLADIEAADVPRFSTGIGEFDRVL
GGGLVPGGVVLIGGDPGIGKSTLLLQSLADIANERRALYISGEESAAQIALRAQRLALLDGGAPAAELKLLAEIQLEKIQ
AAIDSERPDVAVIDSIQTVYSEALTSAPGSVAQVRECAAQLTRIAKQSGTAIIMVGHVTKEGNLAGPRVLEHIVDTVLYF
EGDTHSSFRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQVVPGSCVLVTQEGTRPLLVEIQALVDTAHV
PNPRRLAVGLEQNRLAMLLAVLHRHAGIAAFDQDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKALPKGLIVFGEVGLA
GEIRPSPRGQERLREAAKLGFTSALIPKANAPKQPIEGLNVMAVERLEQAIDRVRDLE
>Mature_457_residues
AKQKTVYVCSECGGQTPKWQGQCPSCQAWNTLVESVAESPAAHRFQSLAKRAPVQRLADIEAADVPRFSTGIGEFDRVLG
GGLVPGGVVLIGGDPGIGKSTLLLQSLADIANERRALYISGEESAAQIALRAQRLALLDGGAPAAELKLLAEIQLEKIQA
AIDSERPDVAVIDSIQTVYSEALTSAPGSVAQVRECAAQLTRIAKQSGTAIIMVGHVTKEGNLAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQVVPGSCVLVTQEGTRPLLVEIQALVDTAHVP
NPRRLAVGLEQNRLAMLLAVLHRHAGIAAFDQDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKALPKGLIVFGEVGLAG
EIRPSPRGQERLREAAKLGFTSALIPKANAPKQPIEGLNVMAVERLEQAIDRVRDLE

Specific function: May play a role in the repair of endogenous alkylation damage [H]

COG id: COG1066

COG function: function code O; Predicted ATP-dependent serine protease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family. RadA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790850, Length=465, Percent_Identity=58.2795698924731, Blast_Score=541, Evalue=1e-155,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF06745 KaiC; PF05362 Lon_C [H]

EC number: NA

Molecular weight: Translated: 48805; Mature: 48674

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQKTVYVCSECGGQTPKWQGQCPSCQAWNTLVESVAESPAAHRFQSLAKRAPVQRLAD
CCCCCEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHC
IEAADVPRFSTGIGEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLADIANERRALYI
CCHHCCCCHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEE
SGEESAAQIALRAQRLALLDGGAPAAELKLLAEIQLEKIQAAIDSERPDVAVIDSIQTVY
ECCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SEALTSAPGSVAQVRECAAQLTRIAKQSGTAIIMVGHVTKEGNLAGPRVLEHIVDTVLYF
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHEE
EGDTHSSFRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQVVPGSCVLVT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEE
QEGTRPLLVEIQALVDTAHVPNPRRLAVGLEQNRLAMLLAVLHRHAGIAAFDQDVFLNAV
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEECCHHHHECC
GGVKITEPAADLAVLLAIHSSMRNKALPKGLIVFGEVGLAGEIRPSPRGQERLREAAKLG
CCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
FTSALIPKANAPKQPIEGLNVMAVERLEQAIDRVRDLE
CHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKQKTVYVCSECGGQTPKWQGQCPSCQAWNTLVESVAESPAAHRFQSLAKRAPVQRLAD
CCCCEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHC
IEAADVPRFSTGIGEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLADIANERRALYI
CCHHCCCCHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEE
SGEESAAQIALRAQRLALLDGGAPAAELKLLAEIQLEKIQAAIDSERPDVAVIDSIQTVY
ECCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SEALTSAPGSVAQVRECAAQLTRIAKQSGTAIIMVGHVTKEGNLAGPRVLEHIVDTVLYF
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHEE
EGDTHSSFRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQVVPGSCVLVT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEE
QEGTRPLLVEIQALVDTAHVPNPRRLAVGLEQNRLAMLLAVLHRHAGIAAFDQDVFLNAV
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEECCHHHHECC
GGVKITEPAADLAVLLAIHSSMRNKALPKGLIVFGEVGLAGEIRPSPRGQERLREAAKLG
CCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
FTSALIPKANAPKQPIEGLNVMAVERLEQAIDRVRDLE
CHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]