| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yfcB [C]
Identifier: 116690054
GI number: 116690054
Start: 2256062
End: 2256970
Strand: Direct
Name: yfcB [C]
Synonym: Bcen2424_2033
Alternate gene names: 116690054
Gene position: 2256062-2256970 (Clockwise)
Preceding gene: 116690053
Following gene: 116690055
Centisome position: 64.76
GC content: 68.43
Gene sequence:
>909_bases ATGACGACACCTTTTGCCACAGTCCGCGACCTGCTGCGCTACGCGGTCACGCGCTTCTCGAAAGCGAAGCTCGCGTTCGG TCACGGTTCCGACAACGCGTACGACGAAGCGGCCTACCTCGTGCTGCACACGCTCGACCTGCCGCTCGACACGCTCGAGC CGTTCATGGACGCGCGCCTCTTGCCCGACGAAATCGCGGCCGTGCTCGCGGTGATCGAACGACGCGCGGCCGACCGCGTG CCGGCCGCGTACCTCACGCACGAAGCATGGATGCACGGCCACCGCTTCTACGTCGACGAACGCGTGATCGTGCCGCGCTC GTTCATCGGCGAACTACTCGACGACGGGCTGCAGCCGTATGTCGCCGATCCCGAGCAGGTCGGCGCGGTGCTCGAACTGT GCACCGGCTCCGGCTGCCTCGCGATCCTCGCGGCAAGCGCGTTCCCGAACGCCGAGATCGACGCGGTCGACCTGTCGGAC AAGGCGCTCGAAGTCGCGGAAATCAACGTGCGCGACTACGGCCTCGAAGACCGCATCGGGCTGCACCGCGGCGACCTCTA CGCACCGCTGCCCGCGTTCCGCACCGATCCCGACTCGCGCTACGACGTGATCCTGACGAACCCGCCGTACGTGAACGCGG CGTCGATGGCCGCGCTGCCGCCCGAATACCGGCACGAGCCGGAGATGGCGCTCGCCGGCGGCGACGACGGGATGGACATC GTGCGACGCATCGTCGCCGAAGCGCACCGCTGGCTGCATGACGACGGCGTGCTCGTCGTCGAGATCGGCAACGAGCGCGA GCACGTCGAAGCGGCATTCGGCGGCCTCGAGCTCACGTGGCTGCCCACCAGCGCGGGCGATGACGCCGTATTCCTGATCC AGGCGTCGGACCTGCCCCGCAAGGGCTGA
Upstream 100 bases:
>100_bases TCCACAAGATCGACGAGCACATCGAAGTGCGCTTCGTCGACCCGCTGAAGAACGTGTACCGACGCGCGCTCGAACAACTG ATCGCCTGACGGAGCCTCGC
Downstream 100 bases:
>100_bases GCGTTGCCGGCCCACCCGCCGTGCGGCGCCCCGTTGCGCCGCACGGTTGGGTAAGATGCGCGTAGGCGGCCGCCCGGCCG CACGACTTCGGGAGTCCCAC
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRV PAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSD KALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPRKG
Sequences:
>Translated_302_residues MTTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRV PAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSD KALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPRKG >Mature_301_residues TTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRVP AAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSDK ALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDIV RRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPRKG
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=241, Percent_Identity=29.045643153527, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI87082085, Length=294, Percent_Identity=47.2789115646259, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI1787463, Length=247, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=4e-14, Organism=Drosophila melanogaster, GI24582226, Length=236, Percent_Identity=27.9661016949153, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 33157; Mature: 33026
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARL CCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEEECCCCHHHHHHHHHCCC LPDEIAAVLAVIERRAADRVPAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPY CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCEEECCHHHHHHHHHCCCCCC VADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCCC LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCHHHCCCCCEEEECCCCCHHH VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPR HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCC KG CC >Mature Secondary Structure TTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARL CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEEECCCCHHHHHHHHHCCC LPDEIAAVLAVIERRAADRVPAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPY CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCEEECCHHHHHHHHHCCCCCC VADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCCC LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCHHHCCCCCEEEECCCCCHHH VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPR HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCC KG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]