Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690046

Identifier: 116690046

GI number: 116690046

Start: 2245058

End: 2246347

Strand: Reverse

Name: 116690046

Synonym: Bcen2424_2025

Alternate gene names: NA

Gene position: 2246347-2245058 (Counterclockwise)

Preceding gene: 116690047

Following gene: 116690045

Centisome position: 64.48

GC content: 70.23

Gene sequence:

>1290_bases
ATGGACGAGTTGACACTCGGTTTGATCGGCGCGGGCGCCGTCGTGGTGGGCGGCGTCGTGGTCTACAACGCATGGCAGGG
CGCGAAAGTGCGGCGCAGGATGCCGCGCCCGATGCCGGAGGAAGCGGCCGAGGCGATGAACCGCCCCGAGCGCGACGAAG
AGTTGCCGTTCATCGAACCGGTGCGTCAGCCGGTGCGCCGCGAGCCCGCGGCACCGGTCGCGGCGGCGCCGGCGGCTGCG
GCCGACGCCGCGCGCGTCGAGCCGACGTTCGGCGGGGCCGGGAGCGGCGCGGCGCCGGCCGATACGCCGGCCGACCTGCA
GGCCGAGGCGACGGGCGTCGACACGTCGGCCGAATCGACCGAACCGGTTGCCGGCGAAGAGGCCGTGCCCGCCGCCACGC
ATGAAGCGGCGGCCGAACCGGCCGAGCCGACCGAACCGGTGATGCCGGCCGCGACGACGGTCTCGTCGGCGCCGCCTGCG
ATCGTCGACCGCCGGATCGACTGCATCGTGCCGATCCGCCTCAACGGCCCGCTGCCGGGCGACAAGATCCTGCCGGTCGC
GCAGCGACTGCGCCGCGCGGGCAGCAAGCCCGTGCACATCGAAGGCAAGCCGGAAGGCGGCCAGTGGGAACTGCTGCAGA
ACGGCGTGCGCTACGAAGAGCTGCGCGCGGCTGCCCAGCTTGCGAACCGCAGCGGCGCGCTGAACGAGCTCGAATTCTCC
GAATTCGTGACGGGCGTCCAGCAGTTCGCGGACGCGATCGACGGCGCGCCGGAATTCCCGGACATGATGGAAACGGTCGC
GATGGCGCGCGAGCTCGACGCGTTTGCCGCGCAGTGCGACGCGCAACTGTCGATCAACGTGATGTCGGACGGTGCGCCGT
GGTCGGCGAACTACGTGCAGGCGGTCGCGTCGCAGGACGGGCTGCTGCTGTCGCGCGACGGCACGCGCTTCGTGAAGCTC
GACGCGAAGCAGAACCCGGTATTCATGCTGCAGTTCGGCGACACCAACTTCCTGCGCGACGACCTGACGTACAAGGGCGG
CAACATGATCACGCTGGTGCTCGACGTGCCGGTGGCGGAAGAGGACATCCTGCCGTTCCGGCTGATGTGCGATTACGCGA
AGTCGCTGTCCGAGCGGATCGGCGCACGCGTCGTCGACGATTCGCGCCGGCCGCTGCCGGAGTCGACGCTGGTCGCGATC
GACCAGCAACTGATGAAGCTGTACGCGAAGCTCGAGGAAGCCGGCATCCCGGCCGGTTCGCCGATCACGCGCCGCCTCTT
TAGCCAGTAA

Upstream 100 bases:

>100_bases
TTTGCCCAGAATTGACGTTTGACGAAACCGGACCGCGTTCGCGCGGCGCACGAGCGCCCGTTCGCGGTCCCGACGAAAAA
GAATTGCTGATGGAGCGTGC

Downstream 100 bases:

>100_bases
TGCGATGGCGCGGGCGACGGTCGTTGGCGCCGTCGTCCGTCGCTGCGGCGCGCACTGTTTCGTGTGCGCTGCAGCACGTC
ATCCGGCCCGCATTGCGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: ZipA Related Protein Possibly Involved In; Protein ZipA; Transmembrane Protein; Chromosome Segregation Protein Smc

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPERDEELPFIEPVRQPVRREPAAPVAAAPAAA
ADAARVEPTFGGAGSGAAPADTPADLQAEATGVDTSAESTEPVAGEEAVPAATHEAAAEPAEPTEPVMPAATTVSSAPPA
IVDRRIDCIVPIRLNGPLPGDKILPVAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFS
EFVTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKL
DAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEEDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAI
DQQLMKLYAKLEEAGIPAGSPITRRLFSQ

Sequences:

>Translated_429_residues
MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPERDEELPFIEPVRQPVRREPAAPVAAAPAAA
ADAARVEPTFGGAGSGAAPADTPADLQAEATGVDTSAESTEPVAGEEAVPAATHEAAAEPAEPTEPVMPAATTVSSAPPA
IVDRRIDCIVPIRLNGPLPGDKILPVAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFS
EFVTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKL
DAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEEDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAI
DQQLMKLYAKLEEAGIPAGSPITRRLFSQ
>Mature_429_residues
MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPERDEELPFIEPVRQPVRREPAAPVAAAPAAA
ADAARVEPTFGGAGSGAAPADTPADLQAEATGVDTSAESTEPVAGEEAVPAATHEAAAEPAEPTEPVMPAATTVSSAPPA
IVDRRIDCIVPIRLNGPLPGDKILPVAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFS
EFVTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKL
DAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAEEDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAI
DQQLMKLYAKLEEAGIPAGSPITRRLFSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45811; Mature: 45811

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPERDEELPFIEP
CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHH
VRQPVRREPAAPVAAAPAAAADAARVEPTFGGAGSGAAPADTPADLQAEATGVDTSAEST
HHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
EPVAGEEAVPAATHEAAAEPAEPTEPVMPAATTVSSAPPAIVDRRIDCIVPIRLNGPLPG
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCEEEEEEEECCCCCC
DKILPVAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFS
CHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
EFVTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH
AVASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAE
HHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCC
EDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAIDQQLMKLYAKLEEAGIPAGS
CCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PITRRLFSQ
HHHHHHHCC
>Mature Secondary Structure
MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPEEAAEAMNRPERDEELPFIEP
CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHH
VRQPVRREPAAPVAAAPAAAADAARVEPTFGGAGSGAAPADTPADLQAEATGVDTSAEST
HHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
EPVAGEEAVPAATHEAAAEPAEPTEPVMPAATTVSSAPPAIVDRRIDCIVPIRLNGPLPG
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCEEEEEEEECCCCCC
DKILPVAQRLRRAGSKPVHIEGKPEGGQWELLQNGVRYEELRAAAQLANRSGALNELEFS
CHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
EFVTGVQQFADAIDGAPEFPDMMETVAMARELDAFAAQCDAQLSINVMSDGAPWSANYVQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH
AVASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVAE
HHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCC
EDILPFRLMCDYAKSLSERIGARVVDDSRRPLPESTLVAIDQQLMKLYAKLEEAGIPAGS
CCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PITRRLFSQ
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA