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The map label for this gene is ybfB [H]

Identifier: 116689991

GI number: 116689991

Start: 2188155

End: 2189390

Strand: Reverse

Name: ybfB [H]

Synonym: Bcen2424_1970

Alternate gene names: 116689991

Gene position: 2189390-2188155 (Counterclockwise)

Preceding gene: 116690003

Following gene: 116689990

Centisome position: 62.84

GC content: 69.74

Gene sequence:

>1236_bases
ATGACACGCCACATGCCGGATTCCCGATACCGCTGGGTGATCGTCGCCGCGGGCGGCTTGATGGGCTGCGTCGCGATCGG
CGCGATGTTCTCGTTGCCGGTGTTCCTGCGATCCATCGCGCGCGATACAGGCTGGTCGATGACCGGCATTTCCGCGGCGA
TGACGCTCGGCTTCATCGCGATGGCGTTCGCCAGCATGGCGTGGGGCAGCCTGTCGGACCGCGTCGGCACGCGGCCCGTC
GTCATCGCGGGCGCCGTGCTGTTGTCGGCGAGCCTGGCGTTGGCGAGCCGCGCGCCGTCGCTGCTCGTGTTCCAGTTGAC
CTTCGGCCTGGCCGTGGGCAGTGCGACGGCCGCGATATTCGCACCGATGATGGCGTGCGTGACCGGCTGGTTCGACACGC
ACCGCAGCCTCGCGGTATCGCTCGTGTCGGCCGGCATGGGGATGGCGCCGATGACGATGGCGCCGCTGGCCGCCTGGCTC
GTGTCGGTGCGCGACTGGCGCACGTCGATGCTGCTGATCGCCGCGCTGGCGGCCGTCGTGATGATCCCGGTGTCGCTGCT
GGTGCGCCGGGCGCCCGCGCTCGATCCTGCATCCGCCCACGCGGCGCCTGCGCCTGCGTCGGCCGGCGCGCCCGCCGCGA
TGTCGGTCGCGGATGCGCTGCGTTCGCCGCAGTTCATGGTGTTGGTGCTGACCAATTTCTTCTGCTGCGCGACCCATTCG
GGCCCGATCTTCCATACGGTCAGCTACGCGGTGACCTGCGGGATTCCGCTGATCGTCGCGGTATCGATCTACAGCGTCGA
AGGGCTGGCGGGCATGGGCGGCCGGATCGCGTTCGGGGTCCTCGGCGATCGCCTCGGCGCGAAGCGCATGCTGGTGGCGG
GGCTGCTCGCGCAGGCGCTCGGCGCGCTCGGCTACTACTTCGTGCGCACGCTCGACGGCTTCTACGCGGTCGCGACGCTG
TTCGGCTTCATCTATGCGGGCGTGATGCCGCTGTATTCGGTGCTCGCGCGCGAGAATTTTCCGCTGCGGATGATGGGCAC
CGTGATCGGCGGCTGCGCGATGGCCGGCAGCCTCGGGATGGCCGCGGGCCCGGTCGCCGGCGGGCTGATCGTCGATGCGT
TGGGCAGCTACGGCTGGCTGTACCTCGGCTCGTTCGCGATCGGGCTCGGCGCGTTCCTGATCGCGACGATGTTCCGCCCG
TTCGCGAAGGCGCAGCCGGAAACGGTGACGGCGTAA

Upstream 100 bases:

>100_bases
CTGCGTCGCCCGTCGTATCGATATCGACCGGGCAGTGCGCCGCGCCATGCGCTCGCCACCCGGTTTTCCGCGAATGGTGC
AACCAACGAGGAGAGGCCAT

Downstream 100 bases:

>100_bases
GCGGGCAACGGAAGCAGGGCGGCTGGCGTTTTTGCCGGGTCGGCAGGCGCCTGCTGGATCGTCGTGGATAAGAAAATGGC
CCGGACCTCACCTCCGTCGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTRHMPDSRYRWVIVAAGGLMGCVAIGAMFSLPVFLRSIARDTGWSMTGISAAMTLGFIAMAFASMAWGSLSDRVGTRPV
VIAGAVLLSASLALASRAPSLLVFQLTFGLAVGSATAAIFAPMMACVTGWFDTHRSLAVSLVSAGMGMAPMTMAPLAAWL
VSVRDWRTSMLLIAALAAVVMIPVSLLVRRAPALDPASAHAAPAPASAGAPAAMSVADALRSPQFMVLVLTNFFCCATHS
GPIFHTVSYAVTCGIPLIVAVSIYSVEGLAGMGGRIAFGVLGDRLGAKRMLVAGLLAQALGALGYYFVRTLDGFYAVATL
FGFIYAGVMPLYSVLARENFPLRMMGTVIGGCAMAGSLGMAAGPVAGGLIVDALGSYGWLYLGSFAIGLGAFLIATMFRP
FAKAQPETVTA

Sequences:

>Translated_411_residues
MTRHMPDSRYRWVIVAAGGLMGCVAIGAMFSLPVFLRSIARDTGWSMTGISAAMTLGFIAMAFASMAWGSLSDRVGTRPV
VIAGAVLLSASLALASRAPSLLVFQLTFGLAVGSATAAIFAPMMACVTGWFDTHRSLAVSLVSAGMGMAPMTMAPLAAWL
VSVRDWRTSMLLIAALAAVVMIPVSLLVRRAPALDPASAHAAPAPASAGAPAAMSVADALRSPQFMVLVLTNFFCCATHS
GPIFHTVSYAVTCGIPLIVAVSIYSVEGLAGMGGRIAFGVLGDRLGAKRMLVAGLLAQALGALGYYFVRTLDGFYAVATL
FGFIYAGVMPLYSVLARENFPLRMMGTVIGGCAMAGSLGMAAGPVAGGLIVDALGSYGWLYLGSFAIGLGAFLIATMFRP
FAKAQPETVTA
>Mature_410_residues
TRHMPDSRYRWVIVAAGGLMGCVAIGAMFSLPVFLRSIARDTGWSMTGISAAMTLGFIAMAFASMAWGSLSDRVGTRPVV
IAGAVLLSASLALASRAPSLLVFQLTFGLAVGSATAAIFAPMMACVTGWFDTHRSLAVSLVSAGMGMAPMTMAPLAAWLV
SVRDWRTSMLLIAALAAVVMIPVSLLVRRAPALDPASAHAAPAPASAGAPAAMSVADALRSPQFMVLVLTNFFCCATHSG
PIFHTVSYAVTCGIPLIVAVSIYSVEGLAGMGGRIAFGVLGDRLGAKRMLVAGLLAQALGALGYYFVRTLDGFYAVATLF
GFIYAGVMPLYSVLARENFPLRMMGTVIGGCAMAGSLGMAAGPVAGGLIVDALGSYGWLYLGSFAIGLGAFLIATMFRPF
AKAQPETVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=393, Percent_Identity=29.0076335877863, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI291621700, Length=418, Percent_Identity=23.444976076555, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI114796626, Length=409, Percent_Identity=26.8948655256724, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1789969, Length=375, Percent_Identity=19.7333333333333, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87082404, Length=342, Percent_Identity=23.0994152046784, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24639306, Length=225, Percent_Identity=26.2222222222222, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42420; Mature: 42289

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHMPDSRYRWVIVAAGGLMGCVAIGAMFSLPVFLRSIARDTGWSMTGISAAMTLGFIA
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MAFASMAWGSLSDRVGTRPVVIAGAVLLSASLALASRAPSLLVFQLTFGLAVGSATAAIF
HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
APMMACVTGWFDTHRSLAVSLVSAGMGMAPMTMAPLAAWLVSVRDWRTSMLLIAALAAVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIPVSLLVRRAPALDPASAHAAPAPASAGAPAAMSVADALRSPQFMVLVLTNFFCCATHS
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCC
GPIFHTVSYAVTCGIPLIVAVSIYSVEGLAGMGGRIAFGVLGDRLGAKRMLVAGLLAQAL
CCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GALGYYFVRTLDGFYAVATLFGFIYAGVMPLYSVLARENFPLRMMGTVIGGCAMAGSLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
AAGPVAGGLIVDALGSYGWLYLGSFAIGLGAFLIATMFRPFAKAQPETVTA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TRHMPDSRYRWVIVAAGGLMGCVAIGAMFSLPVFLRSIARDTGWSMTGISAAMTLGFIA
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MAFASMAWGSLSDRVGTRPVVIAGAVLLSASLALASRAPSLLVFQLTFGLAVGSATAAIF
HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
APMMACVTGWFDTHRSLAVSLVSAGMGMAPMTMAPLAAWLVSVRDWRTSMLLIAALAAVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIPVSLLVRRAPALDPASAHAAPAPASAGAPAAMSVADALRSPQFMVLVLTNFFCCATHS
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCC
GPIFHTVSYAVTCGIPLIVAVSIYSVEGLAGMGGRIAFGVLGDRLGAKRMLVAGLLAQAL
CCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GALGYYFVRTLDGFYAVATLFGFIYAGVMPLYSVLARENFPLRMMGTVIGGCAMAGSLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
AAGPVAGGLIVDALGSYGWLYLGSFAIGLGAFLIATMFRPFAKAQPETVTA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]