| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is atzB [H]
Identifier: 116689977
GI number: 116689977
Start: 2174741
End: 2176153
Strand: Reverse
Name: atzB [H]
Synonym: Bcen2424_1956
Alternate gene names: 116689977
Gene position: 2176153-2174741 (Counterclockwise)
Preceding gene: 116689980
Following gene: 116689974
Centisome position: 62.46
GC content: 69.85
Gene sequence:
>1413_bases ATGAATCTCGAGCAGCACGCTGGCGCACGCGCGCCGAACCCTTCCTCATCCCGCCCGAAAACCCTGCTGGTCAAGCACGC CGACGTGCTCGTGACCATGGACGACACGCGCCGCGAGCTGCGCGACGCGGGGCTCTACATCGAAGACAACCGGATCGTCG CGGTCGGCCCGAGCGCCGAGCTGCCCGACACGGCCGACGAAGTGCTCGACCTGCGCGGCCACCTGGTGATCCCGGGGCTC GTGAACACGCACCACCACATGTACCAGAGCCTCACGCGCGCGGTGCCGGCCGCGCAGAACGCCGAGCTGTTCGGCTGGCT CACGAACCTCTACCGGATCTGGGCGCACCTGAGCCCCGAGATGATCGAGGTGTCGACGCTCACCGCGATGGCCGAGCTGC TGCAGTCGGGCTGCACGACGTCGAGCGATCATCTGTACATCTACCCGAACGGCAGCCGGCTCGACGACAGCATCGGCGCC GCGCAGCGGATCGGCATGCGCTTTCACGCGAGCCGCGGCGCGATGAGCGTCGGCCAGCGCGACGGCGGGCTGCCGCCCGA TTCGGTCGTCGAGCGCGAACCCGACATCCTGCGCGACGCGCAGCGCCTGATCGAGACCTATCACGACGAAGGCCGCTACG CGATGCTGCGCGTGGTGGTCGCGCCGTGCTCGCCGTTCTCGGTGAGCCGCGAGCTGATGCGCGACGCGGCCGTGCTCGCG CGCGAATACGGCGTGTCGCTGCATACGCACCTCGCGGAGAACGTCAACGACATTGCGTACAGCCGCGAGAAGTTCGGGAT GACGCCCGCCGAATATGCGGAAGATCTCGGCTGGGTCGGCCACGACGTGTGGCACGCGCACTGCGTGCAGCTCGACGATG CGGGCATCGGCCTGTTTGCACGCACCGGCACGGGCGTCGCGCATTGCCCGTGCTCGAACATGCGCCTGGCGTCAGGCATC GCGCCGGTGAAGAAGATGCGGCTCGCGGGCGTGCCGGTCGGCCTCGGCGTCGACGGTTCCGCGTCGAACGACGGCGCGCA GATGGTGGCCGAGGTACGCCAGGCGCTGCTGCTGCAGCGGGTCGGCTTCGGGCCCGACGCGATGACCGCGCGCGAAGCGC TCGAGATCGCGACGCTCGGCGGTGCGAAGGTGCTGAACCGCGACGACATCGGCGCGCTGAAGCCCGGCATGGCGGCGGAT TTCGCCGCGTTCGACCTGCGTCAGCCGCTGTTCGCGGGCGCGCTGCACGATCCGGTCGCGGCGCTCGTGTTCTGCGCGCC GTCGCAGACGGCGTACACGGTGGTGAACGGGAAGGTGGTGGTGCGGGAAGGGCGGCTCGCGACGCTCGATTTGCCGCCGG TGATCGAGCGTCACAACGCGCTGGCGCAGGCGCTCGTGGAAGCGTCGCGCTGA
Upstream 100 bases:
>100_bases GAACGGACGCAGGCACCGGGGCGTGCCGCGATTCAGCGTTCGAACGGCAGTGTGACCGCTTCCAGGGCAGCCCCTGGAGG CAGACCGACGCGGAGAACGC
Downstream 100 bases:
>100_bases CGCGTCGGCGGGGAGGTCGCGCAGCACGTTGCGCAGCGGGGCGCGGCCATTGTGGCCACCACCCGTCGCGCAACGCGCCG TGGTCGCGCGTAACGGCGCG
Product: hydroxydechloroatrazine ethylaminohydrolase
Products: NA
Alternate protein names: Hydroxyatrazine hydrolase [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MNLEQHAGARAPNPSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPDTADEVLDLRGHLVIPGL VNTHHHMYQSLTRAVPAAQNAELFGWLTNLYRIWAHLSPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGA AQRIGMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDAQRLIETYHDEGRYAMLRVVVAPCSPFSVSRELMRDAAVLA REYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGI APVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAAD FAAFDLRQPLFAGALHDPVAALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALAQALVEASR
Sequences:
>Translated_470_residues MNLEQHAGARAPNPSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPDTADEVLDLRGHLVIPGL VNTHHHMYQSLTRAVPAAQNAELFGWLTNLYRIWAHLSPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGA AQRIGMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDAQRLIETYHDEGRYAMLRVVVAPCSPFSVSRELMRDAAVLA REYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGI APVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAAD FAAFDLRQPLFAGALHDPVAALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALAQALVEASR >Mature_470_residues MNLEQHAGARAPNPSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPDTADEVLDLRGHLVIPGL VNTHHHMYQSLTRAVPAAQNAELFGWLTNLYRIWAHLSPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGA AQRIGMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDAQRLIETYHDEGRYAMLRVVVAPCSPFSVSRELMRDAAVLA REYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGI APVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAAD FAAFDLRQPLFAGALHDPVAALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALAQALVEASR
Specific function: Catalyzes the deamination reaction of hydroxyatrazine to N-isopropylammelide (dihydroxy-isopropyl-atrazine). The enzyme is also capable of catalyzing some dechlorinating reactions [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=382, Percent_Identity=24.0837696335079, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1789249, Length=440, Percent_Identity=29.7727272727273, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI87082177, Length=425, Percent_Identity=25.4117647058824, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17540282, Length=404, Percent_Identity=23.2673267326733, Blast_Score=90, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319963, Length=345, Percent_Identity=26.0869565217391, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI24643849, Length=357, Percent_Identity=24.9299719887955, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.99.3 [H]
Molecular weight: Translated: 50729; Mature: 50729
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEQHAGARAPNPSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAE CCCCHHCCCCCCCCCCCCCCEEEEEECEEEEEECHHHHHHHHCCCEEECCEEEEECCCCC LPDTADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYRIWAHLSPE CCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH MIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVGQR HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCHHEECCCCCHHCCCC DGGLPPDSVVEREPDILRDAQRLIETYHDEGRYAMLRVVVAPCSPFSVSRELMRDAAVLA CCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH REYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFA HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHEEEEECCCCCEEEE RTGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQR ECCCCEEECCCCCCCHHHCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH VGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFAGALHDPVA CCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHE ALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALAQALVEASR EHEEECCCCCEEEEECCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLEQHAGARAPNPSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAE CCCCHHCCCCCCCCCCCCCCEEEEEECEEEEEECHHHHHHHHCCCEEECCEEEEECCCCC LPDTADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYRIWAHLSPE CCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH MIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVGQR HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCHHEECCCCCHHCCCC DGGLPPDSVVEREPDILRDAQRLIETYHDEGRYAMLRVVVAPCSPFSVSRELMRDAAVLA CCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH REYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFA HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHEEEEECCCCCEEEE RTGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQR ECCCCEEECCCCCCCHHHCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH VGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFAGALHDPVA CCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHE ALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALAQALVEASR EHEEECCCCCEEEEECCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055410 [H]