| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yhbS [H]
Identifier: 116689934
GI number: 116689934
Start: 2120581
End: 2121129
Strand: Reverse
Name: yhbS [H]
Synonym: Bcen2424_1913
Alternate gene names: 116689934
Gene position: 2121129-2120581 (Counterclockwise)
Preceding gene: 116689935
Following gene: 116689928
Centisome position: 60.88
GC content: 71.77
Gene sequence:
>549_bases ATGATGTTCGACCCGAACGCGCCGGTCGAGGTCGTCACGCTGCGTGACGAACGGGCGAGCGAGGCCGATGCGATCGGCCG CGTGATCCGGGCGGCGTTCGCGGGCGAGCCGCAGGGCGGCGAGTTCGAACAGCGCATCGTCGACACGCTGCGCACGGACG GGGCGCTGAGCGTATCGCTCGTCGCGGAGCGCGACGGGCGTATCGTCGGGCACGTCGCGTTCTCGCCCGTCGCGATCGGC GGCGAGCCGGCCGGCAGCCAGCAGTGGTACGGGCTGGCACCGCTCGCGGTGCGGCCCGATTGCCAGCGGCAAAGCATCGG CGCGGGGCTCGTGCGCACGGGGCTCGACGCGTTGCGGCGGCTCGGCGCGCGTGGCTGCGTGGTGCTGGGCGAGCCCGCGT ATTACACGCGTTTCGGGTTCGAACCGCACGGCGACATCGTGTTTCCAGGCGTGCCGCCCGAGTATTTCCTCGCGCTGCCG TTCGACGAATCGGCGCCGCTGCCGGCGGGCGACGTGCGTTATCACGACGTGTTCTATCCCGCCGCGTAG
Upstream 100 bases:
>100_bases CATCGTACGGTCACGATGAGCTGGCACCCGGAAGGCTGGGGTGAAGCGAGCCCGTGGCTGCGCGTGTTCCGCAACGCGCG CCGCTGGATCGGCTGATCGG
Downstream 100 bases:
>100_bases CGAACGCCGCAGGCGGGTAACACCTGGTATGGGAAAGCCGCTCTTCGGAGCGGTTTTTTATTGCGCGTCGGCCACGCACC ATCGCGTCGCGCTACATCTG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MMFDPNAPVEVVTLRDERASEADAIGRVIRAAFAGEPQGGEFEQRIVDTLRTDGALSVSLVAERDGRIVGHVAFSPVAIG GEPAGSQQWYGLAPLAVRPDCQRQSIGAGLVRTGLDALRRLGARGCVVLGEPAYYTRFGFEPHGDIVFPGVPPEYFLALP FDESAPLPAGDVRYHDVFYPAA
Sequences:
>Translated_182_residues MMFDPNAPVEVVTLRDERASEADAIGRVIRAAFAGEPQGGEFEQRIVDTLRTDGALSVSLVAERDGRIVGHVAFSPVAIG GEPAGSQQWYGLAPLAVRPDCQRQSIGAGLVRTGLDALRRLGARGCVVLGEPAYYTRFGFEPHGDIVFPGVPPEYFLALP FDESAPLPAGDVRYHDVFYPAA >Mature_182_residues MMFDPNAPVEVVTLRDERASEADAIGRVIRAAFAGEPQGGEFEQRIVDTLRTDGALSVSLVAERDGRIVGHVAFSPVAIG GEPAGSQQWYGLAPLAVRPDCQRQSIGAGLVRTGLDALRRLGARGCVVLGEPAYYTRFGFEPHGDIVFPGVPPEYFLALP FDESAPLPAGDVRYHDVFYPAA
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789546, Length=172, Percent_Identity=37.2093023255814, Blast_Score=93, Evalue=9e-21, Organism=Escherichia coli, GI1790761, Length=153, Percent_Identity=35.9477124183007, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 19510; Mature: 19510
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFDPNAPVEVVTLRDERASEADAIGRVIRAAFAGEPQGGEFEQRIVDTLRTDGALSVSL CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEE VAERDGRIVGHVAFSPVAIGGEPAGSQQWYGLAPLAVRPDCQRQSIGAGLVRTGLDALRR EECCCCEEEEEEEECEEEECCCCCCCCCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHHH LGARGCVVLGEPAYYTRFGFEPHGDIVFPGVPPEYFLALPFDESAPLPAGDVRYHDVFYP CCCCCEEEECCCCEEEECCCCCCCCEEECCCCHHHEEEECCCCCCCCCCCCCEEEEEEEC AA CC >Mature Secondary Structure MMFDPNAPVEVVTLRDERASEADAIGRVIRAAFAGEPQGGEFEQRIVDTLRTDGALSVSL CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEE VAERDGRIVGHVAFSPVAIGGEPAGSQQWYGLAPLAVRPDCQRQSIGAGLVRTGLDALRR EECCCCEEEEEEEECEEEECCCCCCCCCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHHH LGARGCVVLGEPAYYTRFGFEPHGDIVFPGVPPEYFLALPFDESAPLPAGDVRYHDVFYP CCCCCEEEECCCCEEEECCCCCCCCEEECCCCHHHEEEECCCCCCCCCCCCCEEEEEEEC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]