| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689391
Identifier: 116689391
GI number: 116689391
Start: 1507818
End: 1508129
Strand: Direct
Name: 116689391
Synonym: Bcen2424_1369
Alternate gene names: NA
Gene position: 1507818-1508129 (Clockwise)
Preceding gene: 116689390
Following gene: 116689392
Centisome position: 43.28
GC content: 66.03
Gene sequence:
>312_bases ATGCAACTGCGTGAACTCGCGCATGCGCGCACCGGCGACAAGGGCAATACGCTGAACGTGTCGGTCATCTGCCACGATCC GCGTCATTACGACCATCTGTGCATGCATCTGGATGCGGCAACGGTGAAGGCGCGACTCGCGGGCATCGTGCACGGCGACG TCGTGCGCCACGAATTGCCGGCGCTCGGTGCGTTCAACTTCGTGCTGCGCGATGCGCTCGGCGGCGGCGTCACGCGCTCG CTCGCGCTCGATGCGCACGGCAAGGCGGTCAGTTCGGCGTTGCTGGCGATCGAGGTGCCGGATCCGGTGTGA
Upstream 100 bases:
>100_bases GCGGCGGCGCGTTCAAGTCGACACGCGAGGTGATCGCGGTGCAGTCGGTGCTGCTGCCGCGCGCGGCCGTGACGCCGTCG TTTTCATTCGTGGAGGCCTG
Downstream 100 bases:
>100_bases CGGCGTGACCGTGTGCATAGTCAACCGGGCGCGCGTTCACACTCACATTCGGACTCACGGGATCAGCAGTTCGCGATGCC CGTCCGCGTGCGCGATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELPALGAFNFVLRDALGGGVTRS LALDAHGKAVSSALLAIEVPDPV
Sequences:
>Translated_103_residues MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELPALGAFNFVLRDALGGGVTRS LALDAHGKAVSSALLAIEVPDPV >Mature_103_residues MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELPALGAFNFVLRDALGGGVTRS LALDAHGKAVSSALLAIEVPDPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10962; Mature: 10962
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELP CCHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC ALGAFNFVLRDALGGGVTRSLALDAHGKAVSSALLAIEVPDPV CCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEEEECCCCC >Mature Secondary Structure MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELP CCHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC ALGAFNFVLRDALGGGVTRSLALDAHGKAVSSALLAIEVPDPV CCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA