Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689391

Identifier: 116689391

GI number: 116689391

Start: 1507818

End: 1508129

Strand: Direct

Name: 116689391

Synonym: Bcen2424_1369

Alternate gene names: NA

Gene position: 1507818-1508129 (Clockwise)

Preceding gene: 116689390

Following gene: 116689392

Centisome position: 43.28

GC content: 66.03

Gene sequence:

>312_bases
ATGCAACTGCGTGAACTCGCGCATGCGCGCACCGGCGACAAGGGCAATACGCTGAACGTGTCGGTCATCTGCCACGATCC
GCGTCATTACGACCATCTGTGCATGCATCTGGATGCGGCAACGGTGAAGGCGCGACTCGCGGGCATCGTGCACGGCGACG
TCGTGCGCCACGAATTGCCGGCGCTCGGTGCGTTCAACTTCGTGCTGCGCGATGCGCTCGGCGGCGGCGTCACGCGCTCG
CTCGCGCTCGATGCGCACGGCAAGGCGGTCAGTTCGGCGTTGCTGGCGATCGAGGTGCCGGATCCGGTGTGA

Upstream 100 bases:

>100_bases
GCGGCGGCGCGTTCAAGTCGACACGCGAGGTGATCGCGGTGCAGTCGGTGCTGCTGCCGCGCGCGGCCGTGACGCCGTCG
TTTTCATTCGTGGAGGCCTG

Downstream 100 bases:

>100_bases
CGGCGTGACCGTGTGCATAGTCAACCGGGCGCGCGTTCACACTCACATTCGGACTCACGGGATCAGCAGTTCGCGATGCC
CGTCCGCGTGCGCGATGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELPALGAFNFVLRDALGGGVTRS
LALDAHGKAVSSALLAIEVPDPV

Sequences:

>Translated_103_residues
MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELPALGAFNFVLRDALGGGVTRS
LALDAHGKAVSSALLAIEVPDPV
>Mature_103_residues
MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELPALGAFNFVLRDALGGGVTRS
LALDAHGKAVSSALLAIEVPDPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10962; Mature: 10962

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELP
CCHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
ALGAFNFVLRDALGGGVTRSLALDAHGKAVSSALLAIEVPDPV
CCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEEEECCCCC
>Mature Secondary Structure
MQLRELAHARTGDKGNTLNVSVICHDPRHYDHLCMHLDAATVKARLAGIVHGDVVRHELP
CCHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
ALGAFNFVLRDALGGGVTRSLALDAHGKAVSSALLAIEVPDPV
CCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA