Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689392

Identifier: 116689392

GI number: 116689392

Start: 1508508

End: 1509188

Strand: Direct

Name: 116689392

Synonym: Bcen2424_1370

Alternate gene names: NA

Gene position: 1508508-1509188 (Clockwise)

Preceding gene: 116689391

Following gene: 116689393

Centisome position: 43.3

GC content: 69.6

Gene sequence:

>681_bases
GTGCGCGTCGCGCTCGCGTGTGTCGGCTCGCTGGCCGTGCAGGTCGCCGCCGCCGCGCCGGCGTCGTCGTGCAACGAACG
ACTGACGGCACTGATCGTGCCTGCACTGCCGCAGACCGCGTTCGCCCGGCGCGACATCCATGCCGCCGTGGAGGAGCGCA
ACGGCGACGTTTACCGGATCCGCCTGTTCACGAGCCCCGACCATCCGGGCACGCCGAATCGCGAAGCGACGGTCGGCTGG
GTGACGCTCGATACGCGCGCGATGCAAGCGCTCGACGTCACGCGCGATCCTGATCGGCCGGACGTGCTCAGGATCGACCG
GCGCGCGCTGTCGCATTTCGTGGCGACGTGCGCGGTATCGGCGACGCCGGTACAGAGTGCCGTCGATTGCGATGCGCTGA
ACCGCCGTGCGCAGGCGCAAGGCGATTACGTGATGGGCAGCGACGCCGGGCGCGTCGTCATCGGCAACGGGCGGCTACCG
TTCTTTTCCGCACCGGACGACGCATGCGGGATCGATGGGCTCTTCATCGTCGAGCACGACCACGTCGATGCGCGGACCGA
GTACGGCCGCTTCACGTCGATCGTCTACCTGAATCCGCGCACACGCGGCATCGCCGAAGGGTGGGTGCGCACCGCGCGGC
TGAAGCCGGACGGCACCGGCATCGCGCCCCGGCAACCTTGA

Upstream 100 bases:

>100_bases
CCGCGCGTACCGAACGGAGCCTGGAGTGAAGAACGAGATCGTAACGCCGACCGGCGCGAAGGGCGGGGCCGGACGGCGAA
GCCGGTGCGCGGCCATCGCG

Downstream 100 bases:

>100_bases
TCCGTTGAGTCTGCAACAATTCGCCACATATCAATCCGAACTGATCTCGTCATGGCCCTCCAGAACCGGAACCGCCGTCT
TAAGCCGCTCGCCGCCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRVALACVGSLAVQVAAAAPASSCNERLTALIVPALPQTAFARRDIHAAVEERNGDVYRIRLFTSPDHPGTPNREATVGW
VTLDTRAMQALDVTRDPDRPDVLRIDRRALSHFVATCAVSATPVQSAVDCDALNRRAQAQGDYVMGSDAGRVVIGNGRLP
FFSAPDDACGIDGLFIVEHDHVDARTEYGRFTSIVYLNPRTRGIAEGWVRTARLKPDGTGIAPRQP

Sequences:

>Translated_226_residues
MRVALACVGSLAVQVAAAAPASSCNERLTALIVPALPQTAFARRDIHAAVEERNGDVYRIRLFTSPDHPGTPNREATVGW
VTLDTRAMQALDVTRDPDRPDVLRIDRRALSHFVATCAVSATPVQSAVDCDALNRRAQAQGDYVMGSDAGRVVIGNGRLP
FFSAPDDACGIDGLFIVEHDHVDARTEYGRFTSIVYLNPRTRGIAEGWVRTARLKPDGTGIAPRQP
>Mature_226_residues
MRVALACVGSLAVQVAAAAPASSCNERLTALIVPALPQTAFARRDIHAAVEERNGDVYRIRLFTSPDHPGTPNREATVGW
VTLDTRAMQALDVTRDPDRPDVLRIDRRALSHFVATCAVSATPVQSAVDCDALNRRAQAQGDYVMGSDAGRVVIGNGRLP
FFSAPDDACGIDGLFIVEHDHVDARTEYGRFTSIVYLNPRTRGIAEGWVRTARLKPDGTGIAPRQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24415; Mature: 24415

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVALACVGSLAVQVAAAAPASSCNERLTALIVPALPQTAFARRDIHAAVEERNGDVYRI
CEEHHHHHHHHHHHHHHCCCHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE
RLFTSPDHPGTPNREATVGWVTLDTRAMQALDVTRDPDRPDVLRIDRRALSHFVATCAVS
EEEECCCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
ATPVQSAVDCDALNRRAQAQGDYVMGSDAGRVVIGNGRLPFFSAPDDACGIDGLFIVEHD
CCCCCHHHCHHHHHHHHHCCCCEEEECCCCEEEECCCCCCEECCCCCCCCCCCEEEEEEC
HVDARTEYGRFTSIVYLNPRTRGIAEGWVRTARLKPDGTGIAPRQP
CCCCCCCCCCEEEEEEECCCCCCHHHHHEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRVALACVGSLAVQVAAAAPASSCNERLTALIVPALPQTAFARRDIHAAVEERNGDVYRI
CEEHHHHHHHHHHHHHHCCCHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE
RLFTSPDHPGTPNREATVGWVTLDTRAMQALDVTRDPDRPDVLRIDRRALSHFVATCAVS
EEEECCCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
ATPVQSAVDCDALNRRAQAQGDYVMGSDAGRVVIGNGRLPFFSAPDDACGIDGLFIVEHD
CCCCCHHHCHHHHHHHHHCCCCEEEECCCCEEEECCCCCCEECCCCCCCCCCCEEEEEEC
HVDARTEYGRFTSIVYLNPRTRGIAEGWVRTARLKPDGTGIAPRQP
CCCCCCCCCCEEEEEEECCCCCCHHHHHEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA