| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is xdhA [C]
Identifier: 116689361
GI number: 116689361
Start: 1474882
End: 1477206
Strand: Direct
Name: xdhA [C]
Synonym: Bcen2424_1339
Alternate gene names: 116689361
Gene position: 1474882-1477206 (Clockwise)
Preceding gene: 116689360
Following gene: 116689362
Centisome position: 42.33
GC content: 70.24
Gene sequence:
>2325_bases ATGAGCGCGTCCGAACTCTCCGTGCACAACGCAAGCCGTCGCGCGCTGCTGCTGGGCTTCGCATCGGGCGGGCTGTTGCT CGCGTTCGGCGTGCCGTCGCTCGCGCAGGCGGCCGCGCCGGTGCAGCCGCCCGTCAGCGCGAATCCGCAGTACGGCGGCG CAGGGATGCCGCACGGCTTGCGCGACGATCCGAACCTGTTCGTGGCGATCGCCCCGGACGGCACCGTCACGGTGACCTGC ATCCGCTCCGAGATGGGGCAGGGCGTGCGCACGAGCGTGGCGCTCGTGGTGGCCGACGAGCTCGGCGCGGACTGGGCGCG CGTGAAGGTCGCGCAAGCGGTAGGCGACGAGCCGCGCTACGGCAACCAGAACACCGATGGTTCGCGCAGCCTGCGCCAGA GCTTCGCCGCGCTGCGCCGAGCGGGCGCGGCCGCGCGCACGATGCTCGAGCAAGCCGCGGCAGCGACGTGGGGCGTCGAC GTGCGCCAGGTGAAGGCGACGGTGCACGAGGTCGTCGACACGAAAACCGGCCGCAAGCTCGGCTTCGGCGAACTGGCCGC GAAAGCCGCCGCGCTGCCGGTGCCCGATACGAAAAGCGTGGCGTTGAAGGCGCCGGCCGAATTCCGCTATATCGGCAAGG GCAAGACGGCGCTGATCGACGGACGCGACATCGTAGGCGGGCGGGCGCAGTACGGGATCGATACGCGGCTCGACGGCATG CTGTACGCGGTCGTCGCGCGCCCGCCGGTCTACGGCGATACGGTGGCGTCGTTCGATGCATCGGCTGCCGGGAAGCTGCC GGGTGTCGTGAAGGTCGTGCAACTGGCGTCGACGCCGCTGCCTTCCGGCTTCCAGCCGCTCGGCGGCGTGGCCGTGATTG CGCACGATACGTGGACGGCCATCCAGGCACGCGCGCAGTTGAAGATCGACTGGAAGCACGGACCCAACGCGGGCTACGAC TCGGCCGAATATCGCAAGGCGCTCGAAGCGGCTGCCGCGCAGCCGGGCGACGTGATCCGCAGCGACGGCGACGCGGCGGC GGCACTCGCCGGTGCGGCGAAACGCGTGCGCGCGACGTACTACATTCCGCATCTCGCGCACGCGACGATGGAGCCGCCCG CGGCCGTCGTGCGGGTGGCCGACGGCCGCTGCGAAGTATGGACCTGCACGCAGGCGCCGCAGACCACGCGCGACGAAATC GCGAAGGCGCTCGGCTTGCCGACGGAGCGCGTGACGGTCAACGTGACGCTGCTCGGCGGCGGGTTCGGCCGCAAGTCCAA GCCCGATTACGTGGTGGAAGCCGCGCTGCTGTCGAAGGCGGTCGGCGCACCCGTGAAGCTGACCTTCACGCGCGAGGACG ACATCGCGCACGACTACTTCCACGCGGTGTCGCTCGAAGCGTTCGACGGCGGGATCGATGCGTCGGGGAAGGTGGTCGCG TGGCAGCATCGCACGGTCGCGCCATCGATCCAGTCGACGTTCCGGCCCGGCGTCGTGCACGAGCAGCCGGGCGAGCTCGC GCAAGGCATCGCGGATCTGCCGTTCGCGATTCCGAACGTGCGGATCGAGAATCCGGCCGCGCAAGCGCACACGCGGATCG GCTGGTTCCGCTCGGTGTACAACATTCCGCATGCGTTCGGCATCCAGAGTTTCGTATCGGAGCTCGCGCATGCGGCCGGC CGCGATCCGAAGGATTTCCTGCTCGACCTGATCGGGCCCGCGCGGCGTTTCGAGCCGCACATCACGGTGAAAAACGTGAA CTACGGCGAGGACCCCGCGCTGTATCCGGTCGATACGGGGCGGCTGCGGCGCGTGGTCGAGACGGTCGCGCGCGAAGCCG GGTGGGGGCGCAAGCTGCCGAAGGGGCACGGGCTCGGGATCGCCGCGCATCGCAGCTTCGTGTCGTACACGGCCGCGGTG TGCGAGGTGCAGGTCGATGCGGACGGCAGGATCTCGGTGCCGCGCGTCGACATCGCGATCGACTGCGGGCCGCAGGTCAA TCCGGAGCGCGTGCGTTCGCAACTCGAGGGCGCGGTGGTGATGGGGCTCGGCATCGCGCTGCACGGCGAGATCACGTTCA AGGACGGCCGCCCGGAGCAGAGCAACTTCAACGGCTTCCAGGTGCTGAGAATGAACGAGGCGCCGCGCGAGATCCGCGTG CATCTCGTCGCGCCGGACGATTACGCGACGCCGCTCGGCGGTGTCGGCGAACCGGGCCTGCCGCCCGTCGCGCCGGCGCT GACCAACGCGATCTTCGCGGCGACCGGCACGCGTATCCGCAGCCTGCCGGTGGCCGATCAGCTCGCGAAACCGCAGGCCG GTTGA
Upstream 100 bases:
>100_bases CCGACATCGACGATGCGATGTCCGGCAACATCTGCCGTTGCGGCACCTATACGCGCATTCGCGCGGCGATCCGGCTGGCC GTGCGGCGCGGAGGTGCCGC
Downstream 100 bases:
>100_bases CGCAGCATCTGTCCCGCGCCGGGCCGCATCGTGCGGCCCGGCTCACTTCGAGCCCTGAACAAGGAGCATGACGTGACCTC ATCCGATGTCAGTGTGAAAC
Product: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
Products: NA
Alternate protein names: ALDH [H]
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MSASELSVHNASRRALLLGFASGGLLLAFGVPSLAQAAAPVQPPVSANPQYGGAGMPHGLRDDPNLFVAIAPDGTVTVTC IRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRYGNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAATWGVD VRQVKATVHEVVDTKTGRKLGFGELAAKAAALPVPDTKSVALKAPAEFRYIGKGKTALIDGRDIVGGRAQYGIDTRLDGM LYAVVARPPVYGDTVASFDASAAGKLPGVVKVVQLASTPLPSGFQPLGGVAVIAHDTWTAIQARAQLKIDWKHGPNAGYD SAEYRKALEAAAAQPGDVIRSDGDAAAALAGAAKRVRATYYIPHLAHATMEPPAAVVRVADGRCEVWTCTQAPQTTRDEI AKALGLPTERVTVNVTLLGGGFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFDGGIDASGKVVA WQHRTVAPSIQSTFRPGVVHEQPGELAQGIADLPFAIPNVRIENPAAQAHTRIGWFRSVYNIPHAFGIQSFVSELAHAAG RDPKDFLLDLIGPARRFEPHITVKNVNYGEDPALYPVDTGRLRRVVETVAREAGWGRKLPKGHGLGIAAHRSFVSYTAAV CEVQVDADGRISVPRVDIAIDCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGRPEQSNFNGFQVLRMNEAPREIRV HLVAPDDYATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPQAG
Sequences:
>Translated_774_residues MSASELSVHNASRRALLLGFASGGLLLAFGVPSLAQAAAPVQPPVSANPQYGGAGMPHGLRDDPNLFVAIAPDGTVTVTC IRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRYGNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAATWGVD VRQVKATVHEVVDTKTGRKLGFGELAAKAAALPVPDTKSVALKAPAEFRYIGKGKTALIDGRDIVGGRAQYGIDTRLDGM LYAVVARPPVYGDTVASFDASAAGKLPGVVKVVQLASTPLPSGFQPLGGVAVIAHDTWTAIQARAQLKIDWKHGPNAGYD SAEYRKALEAAAAQPGDVIRSDGDAAAALAGAAKRVRATYYIPHLAHATMEPPAAVVRVADGRCEVWTCTQAPQTTRDEI AKALGLPTERVTVNVTLLGGGFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFDGGIDASGKVVA WQHRTVAPSIQSTFRPGVVHEQPGELAQGIADLPFAIPNVRIENPAAQAHTRIGWFRSVYNIPHAFGIQSFVSELAHAAG RDPKDFLLDLIGPARRFEPHITVKNVNYGEDPALYPVDTGRLRRVVETVAREAGWGRKLPKGHGLGIAAHRSFVSYTAAV CEVQVDADGRISVPRVDIAIDCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGRPEQSNFNGFQVLRMNEAPREIRV HLVAPDDYATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPQAG >Mature_773_residues SASELSVHNASRRALLLGFASGGLLLAFGVPSLAQAAAPVQPPVSANPQYGGAGMPHGLRDDPNLFVAIAPDGTVTVTCI RSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRYGNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAATWGVDV RQVKATVHEVVDTKTGRKLGFGELAAKAAALPVPDTKSVALKAPAEFRYIGKGKTALIDGRDIVGGRAQYGIDTRLDGML YAVVARPPVYGDTVASFDASAAGKLPGVVKVVQLASTPLPSGFQPLGGVAVIAHDTWTAIQARAQLKIDWKHGPNAGYDS AEYRKALEAAAAQPGDVIRSDGDAAAALAGAAKRVRATYYIPHLAHATMEPPAAVVRVADGRCEVWTCTQAPQTTRDEIA KALGLPTERVTVNVTLLGGGFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFDGGIDASGKVVAW QHRTVAPSIQSTFRPGVVHEQPGELAQGIADLPFAIPNVRIENPAAQAHTRIGWFRSVYNIPHAFGIQSFVSELAHAAGR DPKDFLLDLIGPARRFEPHITVKNVNYGEDPALYPVDTGRLRRVVETVAREAGWGRKLPKGHGLGIAAHRSFVSYTAAVC EVQVDADGRISVPRVDIAIDCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGRPEQSNFNGFQVLRMNEAPREIRVH LVAPDDYATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPQAG
Specific function: Presumed To Be A Dehydrogenase, But Possibly An Oxidase. Participates In Limited Purine Salvage (Requires Aspartate) But Does Not Support Aerobic Growth On Purines As The Sole Carbon Source (Purine Catabolism). Deletion Results In Increased Adenine Sensit
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789230, Length=271, Percent_Identity=27.3062730627306, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1786478, Length=135, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.3 [H]
Molecular weight: Translated: 81682; Mature: 81550
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASELSVHNASRRALLLGFASGGLLLAFGVPSLAQAAAPVQPPVSANPQYGGAGMPHGL CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC RDDPNLFVAIAPDGTVTVTCIRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRY CCCCCEEEEECCCCCEEEEEEEHHHCCCCCCEEEEEEEHHHCCCHHHHHHHHHHCCCCCC GNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAATWGVDVRQVKATVHEVVDTKTGRKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC GFGELAAKAAALPVPDTKSVALKAPAEFRYIGKGKTALIDGRDIVGGRAQYGIDTRLDGM CHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCE LYAVVARPPVYGDTVASFDASAAGKLPGVVKVVQLASTPLPSGFQPLGGVAVIAHDTWTA EEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHE IQARAQLKIDWKHGPNAGYDSAEYRKALEAAAAQPGDVIRSDGDAAAALAGAAKRVRATY EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHEEEE YIPHLAHATMEPPAAVVRVADGRCEVWTCTQAPQTTRDEIAKALGLPTERVTVNVTLLGG ECHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEC GFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFDGGIDASGKVVA CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHEEEEEECCCCCCCCCEEE WQHRTVAPSIQSTFRPGVVHEQPGELAQGIADLPFAIPNVRIENPAAQAHTRIGWFRSVY EECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHH NIPHAFGIQSFVSELAHAAGRDPKDFLLDLIGPARRFEPHITVKNVNYGEDPALYPVDTG CCCHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCEECCCHH RLRRVVETVAREAGWGRKLPKGHGLGIAAHRSFVSYTAAVCEVQVDADGRISVPRVDIAI HHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHEEEEEEEEECCCCCEECCEEEEEE DCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGRPEQSNFNGFQVLRMNEAPREIRV ECCCCCCHHHHHHHHCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE HLVAPDDYATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPQAG EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHCCCCCC >Mature Secondary Structure SASELSVHNASRRALLLGFASGGLLLAFGVPSLAQAAAPVQPPVSANPQYGGAGMPHGL CCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC RDDPNLFVAIAPDGTVTVTCIRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRY CCCCCEEEEECCCCCEEEEEEEHHHCCCCCCEEEEEEEHHHCCCHHHHHHHHHHCCCCCC GNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAATWGVDVRQVKATVHEVVDTKTGRKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC GFGELAAKAAALPVPDTKSVALKAPAEFRYIGKGKTALIDGRDIVGGRAQYGIDTRLDGM CHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCE LYAVVARPPVYGDTVASFDASAAGKLPGVVKVVQLASTPLPSGFQPLGGVAVIAHDTWTA EEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHE IQARAQLKIDWKHGPNAGYDSAEYRKALEAAAAQPGDVIRSDGDAAAALAGAAKRVRATY EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHEEEE YIPHLAHATMEPPAAVVRVADGRCEVWTCTQAPQTTRDEIAKALGLPTERVTVNVTLLGG ECHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEC GFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFDGGIDASGKVVA CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHEEEEEECCCCCCCCCEEE WQHRTVAPSIQSTFRPGVVHEQPGELAQGIADLPFAIPNVRIENPAAQAHTRIGWFRSVY EECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHH NIPHAFGIQSFVSELAHAAGRDPKDFLLDLIGPARRFEPHITVKNVNYGEDPALYPVDTG CCCHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCEECCCHH RLRRVVETVAREAGWGRKLPKGHGLGIAAHRSFVSYTAAVCEVQVDADGRISVPRVDIAI HHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHEEEEEEEEECCCCCEECCEEEEEE DCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGRPEQSNFNGFQVLRMNEAPREIRV ECCCCCCHHHHHHHHCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE HLVAPDDYATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPQAG EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2606906 [H]