| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is iorA [H]
Identifier: 116689360
GI number: 116689360
Start: 1474424
End: 1474885
Strand: Direct
Name: iorA [H]
Synonym: Bcen2424_1338
Alternate gene names: 116689360
Gene position: 1474424-1474885 (Clockwise)
Preceding gene: 116689359
Following gene: 116689361
Centisome position: 42.32
GC content: 67.1
Gene sequence:
>462_bases ATGATCACGCTGACCGTCAACGGTAGCGAGCAGCATTTCGACGGCAATCCCGACATGCCGTTGCTCTGGTATCTGCGCGA TGTGCTCGGCCACACCGGCACCAAGTTCGGCTGCGGGATGGCGCTGTGCGGCGCGTGCACCGTGCATCTCGACGGCGTGG CGATCCGCGCGTGCATCACGCCCGTCGCGGTCGCCGCCGGCAAGCGCGTGACGACGATCGAAGGCTTGTCGACGGACCTC ACGCACCCGCTGCAGCAGGCGTGGCAGGAGCTGAACGTCGCGCAATGCGGCTACTGCCAGTCCGGGCAGATCATGCAGGC CGCGTCGCTGCTGAAGACCAATCCCCATCCGACCGACGCCGACATCGACGATGCGATGTCCGGCAACATCTGCCGTTGCG GCACCTATACGCGCATTCGCGCGGCGATCCGGCTGGCCGTGCGGCGCGGAGGTGCCGCATGA
Upstream 100 bases:
>100_bases AAACGGTGCCACGCCTGCCTGATCGTTCGGAATGTGCGCCGCGCCGTTCGAATCCCCACCCGATGCCTGCCCGGCGGGCA TCGCAACCAGGAGGTGAACG
Downstream 100 bases:
>100_bases GCGCGTCCGAACTCTCCGTGCACAACGCAAGCCGTCGCGCGCTGCTGCTGGGCTTCGCATCGGGCGGGCTGTTGCTCGCG TTCGGCGTGCCGTCGCTCGC
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MITLTVNGSEQHFDGNPDMPLLWYLRDVLGHTGTKFGCGMALCGACTVHLDGVAIRACITPVAVAAGKRVTTIEGLSTDL THPLQQAWQELNVAQCGYCQSGQIMQAASLLKTNPHPTDADIDDAMSGNICRCGTYTRIRAAIRLAVRRGGAA
Sequences:
>Translated_153_residues MITLTVNGSEQHFDGNPDMPLLWYLRDVLGHTGTKFGCGMALCGACTVHLDGVAIRACITPVAVAAGKRVTTIEGLSTDL THPLQQAWQELNVAQCGYCQSGQIMQAASLLKTNPHPTDADIDDAMSGNICRCGTYTRIRAAIRLAVRRGGAA >Mature_153_residues MITLTVNGSEQHFDGNPDMPLLWYLRDVLGHTGTKFGCGMALCGACTVHLDGVAIRACITPVAVAAGKRVTTIEGLSTDL THPLQQAWQELNVAQCGYCQSGQIMQAASLLKTNPHPTDADIDDAMSGNICRCGTYTRIRAAIRLAVRRGGAA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=147, Percent_Identity=37.4149659863946, Blast_Score=84, Evalue=5e-17, Organism=Homo sapiens, GI71773480, Length=97, Percent_Identity=36.0824742268041, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1786480, Length=161, Percent_Identity=41.6149068322981, Blast_Score=110, Evalue=5e-26, Organism=Escherichia coli, GI1789232, Length=142, Percent_Identity=38.7323943661972, Blast_Score=85, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17540638, Length=153, Percent_Identity=39.2156862745098, Blast_Score=112, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=37.012987012987, Blast_Score=103, Evalue=4e-23, Organism=Caenorhabditis elegans, GI32566215, Length=156, Percent_Identity=36.5384615384615, Blast_Score=99, Evalue=7e-22, Organism=Drosophila melanogaster, GI17737937, Length=152, Percent_Identity=35.5263157894737, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI24647193, Length=157, Percent_Identity=34.3949044585987, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI24647199, Length=135, Percent_Identity=34.8148148148148, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647201, Length=152, Percent_Identity=31.5789473684211, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24647195, Length=159, Percent_Identity=32.0754716981132, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24647197, Length=159, Percent_Identity=32.0754716981132, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16271; Mature: 16271
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLTVNGSEQHFDGNPDMPLLWYLRDVLGHTGTKFGCGMALCGACTVHLDGVAIRACIT CEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCHHHHHHH PVAVAAGKRVTTIEGLSTDLTHPLQQAWQELNVAQCGYCQSGQIMQAASLLKTNPHPTDA HHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCCC DIDDAMSGNICRCGTYTRIRAAIRLAVRRGGAA CCCHHCCCCEEECCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MITLTVNGSEQHFDGNPDMPLLWYLRDVLGHTGTKFGCGMALCGACTVHLDGVAIRACIT CEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCHHHHHHH PVAVAAGKRVTTIEGLSTDLTHPLQQAWQELNVAQCGYCQSGQIMQAASLLKTNPHPTDA HHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCCC DIDDAMSGNICRCGTYTRIRAAIRLAVRRGGAA CCCHHCCCCEEECCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]