Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689283

Identifier: 116689283

GI number: 116689283

Start: 1394594

End: 1394896

Strand: Direct

Name: 116689283

Synonym: Bcen2424_1261

Alternate gene names: NA

Gene position: 1394594-1394896 (Clockwise)

Preceding gene: 116689282

Following gene: 116689286

Centisome position: 40.03

GC content: 68.98

Gene sequence:

>303_bases
ATGAAATGCCCTGTCTGCAAGACGCCCGACCTGCTGATGGCCGAGCGCCAGTCGATCGAGATCGATTACTGTCCGACCTG
CCGCGGCGTGTGGCTCGATCGCGGCGAACTCGACAAGCTGCTCGCCCGCGAAACCGGTGACGCGCCGGCGCGACGCGACA
CGGCGCCAGTGCAGCACGATGCGCACGCGCCGCGCGGCCGCGACGACGGCTGGGGGCGCGACGCGCGCTCGCACGACGGG
CGTGACCGGCACGACGGCCGGCGTCGCAAGAAGTCGGTGTTCGATCTGTTCGATTTCGATTGA

Upstream 100 bases:

>100_bases
GCGCGACTAAGCGGGCGCGCGTGATGCCGGCCGCTGTGGCAGCCGGCTCGCGCACCTCATATGGAATCCGGATGAAATTC
GCACGGAAAGGAGAAACGCG

Downstream 100 bases:

>100_bases
ATCTGCCGTCCGCGCGCTTGAGCGCGCGCGGCCCGATGCAAAAAAGCCCCGCCCGGCATCGCGCCGGAGCGGGGCTTTTT
CATGCGCGTCGCGTCAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHDAHAPRGRDDGWGRDARSHDG
RDRHDGRRRKKSVFDLFDFD

Sequences:

>Translated_100_residues
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHDAHAPRGRDDGWGRDARSHDG
RDRHDGRRRKKSVFDLFDFD
>Mature_100_residues
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHDAHAPRGRDDGWGRDARSHDG
RDRHDGRRRKKSVFDLFDFD

Specific function: Unknown

COG id: COG3809

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11505; Mature: 11505

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHD
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
AHAPRGRDDGWGRDARSHDGRDRHDGRRRKKSVFDLFDFD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHD
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
AHAPRGRDDGWGRDARSHDGRDRHDGRRRKKSVFDLFDFD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA