| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689283
Identifier: 116689283
GI number: 116689283
Start: 1394594
End: 1394896
Strand: Direct
Name: 116689283
Synonym: Bcen2424_1261
Alternate gene names: NA
Gene position: 1394594-1394896 (Clockwise)
Preceding gene: 116689282
Following gene: 116689286
Centisome position: 40.03
GC content: 68.98
Gene sequence:
>303_bases ATGAAATGCCCTGTCTGCAAGACGCCCGACCTGCTGATGGCCGAGCGCCAGTCGATCGAGATCGATTACTGTCCGACCTG CCGCGGCGTGTGGCTCGATCGCGGCGAACTCGACAAGCTGCTCGCCCGCGAAACCGGTGACGCGCCGGCGCGACGCGACA CGGCGCCAGTGCAGCACGATGCGCACGCGCCGCGCGGCCGCGACGACGGCTGGGGGCGCGACGCGCGCTCGCACGACGGG CGTGACCGGCACGACGGCCGGCGTCGCAAGAAGTCGGTGTTCGATCTGTTCGATTTCGATTGA
Upstream 100 bases:
>100_bases GCGCGACTAAGCGGGCGCGCGTGATGCCGGCCGCTGTGGCAGCCGGCTCGCGCACCTCATATGGAATCCGGATGAAATTC GCACGGAAAGGAGAAACGCG
Downstream 100 bases:
>100_bases ATCTGCCGTCCGCGCGCTTGAGCGCGCGCGGCCCGATGCAAAAAAGCCCCGCCCGGCATCGCGCCGGAGCGGGGCTTTTT CATGCGCGTCGCGTCAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHDAHAPRGRDDGWGRDARSHDG RDRHDGRRRKKSVFDLFDFD
Sequences:
>Translated_100_residues MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHDAHAPRGRDDGWGRDARSHDG RDRHDGRRRKKSVFDLFDFD >Mature_100_residues MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHDAHAPRGRDDGWGRDARSHDG RDRHDGRRRKKSVFDLFDFD
Specific function: Unknown
COG id: COG3809
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11505; Mature: 11505
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHD CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC AHAPRGRDDGWGRDARSHDGRDRHDGRRRKKSVFDLFDFD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLLARETGDAPARRDTAPVQHD CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC AHAPRGRDDGWGRDARSHDGRDRHDGRRRKKSVFDLFDFD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA