| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is astE
Identifier: 116689207
GI number: 116689207
Start: 1302384
End: 1303412
Strand: Direct
Name: astE
Synonym: Bcen2424_1185
Alternate gene names: 116689207
Gene position: 1302384-1303412 (Clockwise)
Preceding gene: 116689206
Following gene: 116689208
Centisome position: 37.38
GC content: 71.72
Gene sequence:
>1029_bases ATGCCGGCCGCCGCGTTGCTCGACGATTTTCTGGCGTTCACGCTCGCTGGTGACGCGCCGGCCGAACGGGACGGCGCCTG CGCGGGCGGCGCGGTGCGCTGGCAATGGCTCGGCGACGGGCTGCTCGCGTTCGAACCGGCGGCGACCGACGCCGCGGCGC GCGCGAGCGTGCTCGTGTCGGCCGGCGTGCATGGCGACGAGACCGCGCCGATCGAGCTGCTGTCGATGCTCGCGCGCGAC CTCGTGGCGGGTGCGCTGCCGCTCGCGTGCCGGCTGCTCGTCGTGCTCGGCAACGTGCCGGCGATGCGCGCGGGCGAACG CTATCTCGACGATGACCTGAACCGCCTGTTCAGCGGCCGTCACGCGCAGGTGCCCGCGAGTCGCGAAGCGCCGCGCGCCG CGCAGCTCGAAGCGGCGGCATCCGCGTTCTTCGGGGCGGCGCCGGCGGGCAGCGCACGCTGGCATATCGACATGCACACG GCGATTCGCGCATCGGTGTTCGAACAGTTCGCGCTGCTGCCGCACACGGGCACGCCGCCCACGCGCGCGATGGTCGAATG GCTCGGCGATGCACGCATCGCGGCCGTGCTGCTGCATACGGCGAAGGGCAACACGTATTCGCATTTCACGGCCGAGCATT GCGGCGCGCTCGCGTGCACGCTGGAGCTCGGCAAGGTGCGTCCGTTCGGCCAGAACGACCTGACGCGCTTCGCGCCGGCC GACCGCGCGGTGCGCAAGCTCGTGTCGGGTGGGCGGGCGGAAGGCGGCGCCACGTTGCCGCGCGTGTTCACCGTCATCGA CCAGATCACGAAGCAGAGCGACGCGCTCGAGCTGTTCGTCGCGGCCGACGTCGCGAACTTCACCGCGTTCACGCGCGGCA CCGTGCTCGCGCAGGACGGCGACTACCGCTACACGGTGAAGCACGACGAGGAACGCATCGTGTTTCCGAACCCGACCGTG AAGCCCGGCCTGCGCGCGGGCCTGCTCGTCGTCGATACGACGCGCGACACGCTGGCCGCACTCGTCTGA
Upstream 100 bases:
>100_bases GCCGATCCGGCGCTGCTCGACGAGTCGCGTACGGCGCTCGACGAGCTTACGCAGATCCTGCGCGTCGGTTCGCTGTATGA CTTCCAGCGCTGAGGCACGG
Downstream 100 bases:
>100_bases TCAGGGTGCGATCGTGCGGGCTGCGGCGACTCGCAGTCCGCGCATCGTCTCGCGGTCTATTCATTTTTTGCGATAACACC CGCCCGCCGCACGGCCGGCG
Product: succinylglutamate desuccinylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPAAALLDDFLAFTLAGDAPAERDGACAGGAVRWQWLGDGLLAFEPAATDAAARASVLVSAGVHGDETAPIELLSMLARD LVAGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPASREAPRAAQLEAAASAFFGAAPAGSARWHIDMHT AIRASVFEQFALLPHTGTPPTRAMVEWLGDARIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQNDLTRFAPA DRAVRKLVSGGRAEGGATLPRVFTVIDQITKQSDALELFVAADVANFTAFTRGTVLAQDGDYRYTVKHDEERIVFPNPTV KPGLRAGLLVVDTTRDTLAALV
Sequences:
>Translated_342_residues MPAAALLDDFLAFTLAGDAPAERDGACAGGAVRWQWLGDGLLAFEPAATDAAARASVLVSAGVHGDETAPIELLSMLARD LVAGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPASREAPRAAQLEAAASAFFGAAPAGSARWHIDMHT AIRASVFEQFALLPHTGTPPTRAMVEWLGDARIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQNDLTRFAPA DRAVRKLVSGGRAEGGATLPRVFTVIDQITKQSDALELFVAADVANFTAFTRGTVLAQDGDYRYTVKHDEERIVFPNPTV KPGLRAGLLVVDTTRDTLAALV >Mature_341_residues PAAALLDDFLAFTLAGDAPAERDGACAGGAVRWQWLGDGLLAFEPAATDAAARASVLVSAGVHGDETAPIELLSMLARDL VAGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPASREAPRAAQLEAAASAFFGAAPAGSARWHIDMHTA IRASVFEQFALLPHTGTPPTRAMVEWLGDARIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQNDLTRFAPAD RAVRKLVSGGRAEGGATLPRVFTVIDQITKQSDALELFVAADVANFTAFTRGTVLAQDGDYRYTVKHDEERIVFPNPTVK PGLRAGLLVVDTTRDTLAALV
Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily
Homologues:
Organism=Escherichia coli, GI1788040, Length=324, Percent_Identity=45.9876543209877, Blast_Score=291, Evalue=5e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ASTE_BURCA (Q1BXN9)
Other databases:
- EMBL: CP000378 - RefSeq: YP_620589.1 - ProteinModelPortal: Q1BXN9 - SMR: Q1BXN9 - STRING: Q1BXN9 - GeneID: 4092824 - GenomeReviews: CP000378_GR - KEGG: bcn:Bcen_0706 - eggNOG: COG2988 - HOGENOM: HBG298271 - OMA: RWRWLGH - ProtClustDB: PRK05324 - BioCyc: BCEN331271:BCEN_0706-MONOMER - HAMAP: MF_00767 - InterPro: IPR007036 - InterPro: IPR016681 - PIRSF: PIRSF017020 - TIGRFAMs: TIGR03242
Pfam domain/function: PF04952 AstE_AspA
EC number: =3.5.1.96
Molecular weight: Translated: 36200; Mature: 36068
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: ACT_SITE 222-222
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAALLDDFLAFTLAGDAPAERDGACAGGAVRWQWLGDGLLAFEPAATDAAARASVLVS CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHEEE AGVHGDETAPIELLSMLARDLVAGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCC HAQVPASREAPRAAQLEAAASAFFGAAPAGSARWHIDMHTAIRASVFEQFALLPHTGTPP CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCH TRAMVEWLGDARIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQNDLTRFAPA HHHHHHHHCCHHEEHHEEECCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCCCHHHCCH DRAVRKLVSGGRAEGGATLPRVFTVIDQITKQSDALELFVAADVANFTAFTRGTVLAQDG HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECC DYRYTVKHDEERIVFPNPTVKPGLRAGLLVVDTTRDTLAALV CEEEEEECCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHCC >Mature Secondary Structure PAAALLDDFLAFTLAGDAPAERDGACAGGAVRWQWLGDGLLAFEPAATDAAARASVLVS CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHEEE AGVHGDETAPIELLSMLARDLVAGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCC HAQVPASREAPRAAQLEAAASAFFGAAPAGSARWHIDMHTAIRASVFEQFALLPHTGTPP CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCH TRAMVEWLGDARIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQNDLTRFAPA HHHHHHHHCCHHEEHHEEECCCCCCCCCCCHHHHCEEEEEEECCCCCCCCCCCCHHHCCH DRAVRKLVSGGRAEGGATLPRVFTVIDQITKQSDALELFVAADVANFTAFTRGTVLAQDG HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECC DYRYTVKHDEERIVFPNPTVKPGLRAGLLVVDTTRDTLAALV CEEEEEECCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA