| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689208
Identifier: 116689208
GI number: 116689208
Start: 1303418
End: 1303768
Strand: Direct
Name: 116689208
Synonym: Bcen2424_1186
Alternate gene names: NA
Gene position: 1303418-1303768 (Clockwise)
Preceding gene: 116689207
Following gene: 116689209
Centisome position: 37.41
GC content: 64.39
Gene sequence:
>351_bases GTGCGATCGTGCGGGCTGCGGCGACTCGCAGTCCGCGCATCGTCTCGCGGTCTATTCATTTTTTGCGATAACACCCGCCC GCCGCACGGCCGGCGCACGCGCCACGCTTGCGTATTTGCGACACCGTCTTGCGAGTTCGACGGGGCGCGTGGCGGCTCCC GGACGCGCAGCGCAGCATTGCATATCGGTGGCCGCTTTGCCATATCGGGTCGCGCGGATTGGTACAATCGCGGCCTTGCG GCTGTTGCGCCGCATCACGGCGCGGCATCGGCATTGTCGGTGTCATCCGACCCTGCAATGATGCATGCGCCCGTAGTTCC GGAACATTCGAGTATCGAGGAGAACACCTGA
Upstream 100 bases:
>100_bases GCATCGTGTTTCCGAACCCGACCGTGAAGCCCGGCCTGCGCGCGGGCCTGCTCGTCGTCGATACGACGCGCGACACGCTG GCCGCACTCGTCTGATCAGG
Downstream 100 bases:
>100_bases TGAAGTTGGATTGGCGTAAAGTGGCCGCGCATGCGGTGGTGGCGGCATCGGCGATGGCGGCAGGCAGCGCGTTTGCCGCG GATCTGAAGGAGATCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRSCGLRRLAVRASSRGLFIFCDNTRPPHGRRTRHACVFATPSCEFDGARGGSRTRSAALHIGGRFAISGRADWYNRGLA AVAPHHGAASALSVSSDPAMMHAPVVPEHSSIEENT
Sequences:
>Translated_116_residues MRSCGLRRLAVRASSRGLFIFCDNTRPPHGRRTRHACVFATPSCEFDGARGGSRTRSAALHIGGRFAISGRADWYNRGLA AVAPHHGAASALSVSSDPAMMHAPVVPEHSSIEENT >Mature_116_residues MRSCGLRRLAVRASSRGLFIFCDNTRPPHGRRTRHACVFATPSCEFDGARGGSRTRSAALHIGGRFAISGRADWYNRGLA AVAPHHGAASALSVSSDPAMMHAPVVPEHSSIEENT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12411; Mature: 12411
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSCGLRRLAVRASSRGLFIFCDNTRPPHGRRTRHACVFATPSCEFDGARGGSRTRSAAL CCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE HIGGRFAISGRADWYNRGLAAVAPHHGAASALSVSSDPAMMHAPVVPEHSSIEENT EECCEEEECCCCCHHHCCEEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MRSCGLRRLAVRASSRGLFIFCDNTRPPHGRRTRHACVFATPSCEFDGARGGSRTRSAAL CCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE HIGGRFAISGRADWYNRGLAAVAPHHGAASALSVSSDPAMMHAPVVPEHSSIEENT EECCEEEECCCCCHHHCCEEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA