| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is plcN [H]
Identifier: 116689188
GI number: 116689188
Start: 1278638
End: 1280782
Strand: Reverse
Name: plcN [H]
Synonym: Bcen2424_1166
Alternate gene names: 116689188
Gene position: 1280782-1278638 (Counterclockwise)
Preceding gene: 116689189
Following gene: 116689187
Centisome position: 36.76
GC content: 68.81
Gene sequence:
>2145_bases ATGACCCGATCGAACCGTCGTGACTTCCTGCGCGTCGCCGCCGGCACTGCCGGCGCCGCCGCGCTGAACCTGTTTCCGCC CGTGATCCGGGATGCGCTCGCGATTCCCGCGAACCGCCGCACCGGCACGATCCGCGACATCGAACACATCGTGATCCTGA TGCAGGAGAACCGCTCGTTCGACCACTACTTCGGCACGATGCGCGGTGTCCGCGGCTTCGGTGACCCGCGCCCGTTGCGC CTCGCGAACGGCAAGTCGGTGTTTCACCAGCCGGTCGGCCCGGCCGAACTGCTGCCGTTCCACCCGGGCGTCGACAAGCT CGGCCTGCAGTTCCTGCAGGACCTGCCGCACGGCTGGCAGGACATGCACGCCGCCTGGAACAAGGGCCGCTACGACCAGT GGGTGCCGAACAAGGGCACCACGACGATGGCGTACCTGAAGCGCGACGACATCCCGTTCCACTATCAGCTCGCCGACGCG TTCACGATCTGCGACGCATACCACTGCGCGATCCCGAGCTCGACCGACCCGAACCGCTACTACATGTGGACGGGCTACGT CGGCAACGACGGCACGGGCGGGGGTCCGGTGCTCGGCAACGAGGAAAAGGGCTACGGCTGGACGACCTATCCGGAAGTGC TCGAACAGGCCGGCGTGTCGTGGAAGATCTACCAGGACGTCGGCACGGGGCTCGACGCGAACGGCTCGTGGGGCTGGACG CAAAACCCGTACATCGGCAACTACGGCGACAACTCGCTGCTCTACTTCAACCAGTACCGCTCCGCGCTGCCCGGCACGCC GCTGTACGACAAGGCGCGCACCGGCACCAACATCAGCGCCGGCGGCACGCTGTTCGACGTGCTGCAGCAGGACGTGAAGA ACGGCACGCTGCCGCAGGTGTCGTGGATCTGCGCGCCCGAAGCGTATTCCGAGCACCCGAACTGGCCGGCGAACTATGGC GCGTGGTACATCGAGCAGGTGCTGAAGGCGCTCGTGTCGAATCCCGACGTGTGGAGCAAGACCGCGCTGTTCATCACGTA CGACGAAAACGACGGCTTCTTCGATCACGTGCCGCCGCCGTTCGCGCCGCAGTCGCGCGAGAACGGGCTGTCGACGGTCG CGACGACCAACGAGGTGTTCGCCGGCGACGCGTCGCACATGGCCGGCCCTTACGGGCTCGGGCCGCGCGTGCCGATGCTG GTCGTGTCGCCGTGGACCAAGGGCGGCTGGGTCTGCTCGCAGACCTTCGATCACACGTCGCTGCTGCAATTCATCGAGGC GCGCTTCGGCGCGCAGTATCCGGTCACGGCCGCCAACGTGTCGCCGTGGCGCCGCGCGGTGTGCGGCGACCTGACGTCGG CGTTCGAGTTCGCGACCGCGGACGCCGCATGGCCGACGCTGCCCGACACCAGCGGCTACGCGCCGCCCGACCGCGTGCGC CATCCCGACTACATCCCGGTGCCGCCGGTGCTGCAGAAGCTGCCGAAACAGGAAGCCGGGCTGCGTCCGGCGCGCGCTCT GCCGTACGAGCTGTTCGTGCACGGCCGCGTCGAAGCCGCCAACGGCCAGTTCCGGCTGACCTTCGCGAACACGGGCCGGG CGGGCGCCGCGTTCCAGGTCCAGTCGCGCAACCGCGTCGACGGCCCGTGGGCGTACACGGTCGAAGCCGGCAAACGTATC GCCGATACGTGGAGCGCCGCCGCATCGCTCGGCCTGTACGACCTCGACGTATACGGCCCGAACGGCTTCTACTGCCATTT CCGCGGCCCGTTCGCGACCGGGGTCGGCAGCGCGGACGTGAACCCCGAGGTGATCTACGGCTACGACGTCGCGAACGGCA ACATCACGCTGCGCCTGATGAACCGCGGCCACAAGGCCGTGCGGCTCAAGGTCACGAACGCGTACGGCCACGGTCACGCG CGCACGTTCGACCTCGCGCCGGGCGCGCACGTCGACGATTACTGGGACCTGCGCGGCAGCCACGGCTGGTACGACCTCAC CGTCAGCGACGGCCGCCTGCTCGGCTTCCTGCGCCGCTTCGCCGGCCACGTCGAAACGGGCCGCCCGAGCACCAGCGACC CGCTGATCCGCACGACCGCGTCGCACGACGACGCCGAAGCCGCGTCGGACGCCCTGTCCGACTGA
Upstream 100 bases:
>100_bases CGCGGCGGCATGCACCGGCGCAGCCGCATCCTGCGACCCGGTGCGCGCCCTTCCCGCAGGTCCCGCCAATCGGCTCCCTC TTTACCCCACGATAACGACC
Downstream 100 bases:
>100_bases CGTCGACCCACGCGCGGCGCGGCCCTTCTGACGGGCCGCGCCGCGTTTTTGCCCGCACCGCCCCTCTTCTCTGCGCCCGT TGCGTTCGCGACGGGAAACT
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIRDIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLR LANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAAWNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADA FTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGYGWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWT QNPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYG AWYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQSRENGLSTVATTNEVFAGDASHMAGPYGLGPRVPML VVSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRRAVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVR HPDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFRLTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRI ADTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVIYGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHA RTFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVETGRPSTSDPLIRTTASHDDAEAASDALSD
Sequences:
>Translated_714_residues MTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIRDIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLR LANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAAWNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADA FTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGYGWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWT QNPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYG AWYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQSRENGLSTVATTNEVFAGDASHMAGPYGLGPRVPML VVSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRRAVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVR HPDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFRLTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRI ADTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVIYGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHA RTFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVETGRPSTSDPLIRTTASHDDAEAASDALSD >Mature_713_residues TRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIRDIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRL ANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAAWNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAF TICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGYGWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWTQ NPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGA WYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQSRENGLSTVATTNEVFAGDASHMAGPYGLGPRVPMLV VSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRRAVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVRH PDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFRLTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRIA DTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVIYGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHAR TFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVETGRPSTSDPLIRTTASHDDAEAASDALSD
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 78578; Mature: 78447
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIRDIEHIVILMQENRSF CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCH DHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQ HHHHHHHHHCCCCCCCCCEEEECCCHHEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCHH DMHAAWNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRY HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHEECCCCCCCCCEE YMWTGYVGNDGTGGGPVLGNEEKGYGWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWT EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCC QNPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQV CCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE SWICAPEAYSEHPNWPANYGAWYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPP EEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCC FAPQSRENGLSTVATTNEVFAGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTS CCCCCCCCCCEEEEECCHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHH LLQFIEARFGAQYPVTAANVSPWRRAVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVR HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC HPDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFRLTFANTGRAGAAFQV CCCCCCCCHHHHHCCHHHHCCCCHHCCCEEEEEEEEEEECCCEEEEEEECCCCCCCEEEE QSRNRVDGPWAYTVEAGKRIADTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADV CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCHHCCCCCCCC NPEVIYGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHARTFDLAPGAHVDDYWDLRGS CCEEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCHHCCCCC HGWYDLTVSDGRLLGFLRRFAGHVETGRPSTSDPLIRTTASHDDAEAASDALSD CCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure TRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIRDIEHIVILMQENRSF CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCH DHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQ HHHHHHHHHCCCCCCCCCEEEECCCHHEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCHH DMHAAWNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRY HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHEECCCCCCCCCEE YMWTGYVGNDGTGGGPVLGNEEKGYGWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWT EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCC QNPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQV CCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE SWICAPEAYSEHPNWPANYGAWYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPP EEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCC FAPQSRENGLSTVATTNEVFAGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTS CCCCCCCCCCEEEEECCHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHH LLQFIEARFGAQYPVTAANVSPWRRAVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVR HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC HPDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFRLTFANTGRAGAAFQV CCCCCCCCHHHHHCCHHHHCCCCHHCCCEEEEEEEEEEECCCEEEEEEECCCCCCCEEEE QSRNRVDGPWAYTVEAGKRIADTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADV CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCHHCCCCCCCC NPEVIYGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHARTFDLAPGAHVDDYWDLRGS CCEEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCHHCCCCC HGWYDLTVSDGRLLGFLRRFAGHVETGRPSTSDPLIRTTASHDDAEAASDALSD CCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]