| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pgsA [H]
Identifier: 116689166
GI number: 116689166
Start: 1255919
End: 1256506
Strand: Direct
Name: pgsA [H]
Synonym: Bcen2424_1144
Alternate gene names: 116689166
Gene position: 1255919-1256506 (Clockwise)
Preceding gene: 116689165
Following gene: 116689167
Centisome position: 36.05
GC content: 64.46
Gene sequence:
>588_bases ATGCCGTTCAATTTCCCGATTTTCCTGACGTGGGTACGGATCGTGCTGATTCCGCTCGTCGTCGGCGTGTTCTATCTGCC GGACACGGTGATGGGCGGCGCGCACCGCAATCTCGCGGCGGCGGCGATCTTCATCCTCGCCGCGCTGACCGACTGGTTCG ACGGCTTCCTCGCGCGCAAGTGGAATCAGACGTCGTCGTTCGGTGCCTTTCTCGACCCGGTGGCGGACAAGCTGATGGTG ACGGCCGCGCTGCTGATCCTCGTGCAGATTTCGCGGGTCGACGCGGCGATCGCGCTGGTGATCGTCGGTCGCGAGATCGC GATTTCGGCGCTGCGCGAGTGGATGGCGCAGATCGGCGCGTCGAAGAGCGTCGCGGTGAACCAGCTCGGCAAGTTCAAGA CCGCGTGCCAGATGGTCGCGATTCCGATGCTGCTGTTTTACGGGCCGCTGCCGCTCGGCGTCGTGACGATCGATACGCGC GTGTGGGGCGAGTGGCTGATGTATCTGGCCGCGGTGCTGACGATCTGGTCGATGCTGTACTACATGAAGCTCGCCTGGCC GCAGATTCGCGAGCGCGGCGGTGCGTGA
Upstream 100 bases:
>100_bases AGCTTCACTGACGCGGCCGTGCGGCCGGCTCGTTGCCAGCGTTCTTGTGGCAGGCCGGTCGACACGGCACAATTGCGAAT CCTTTACTGTCCCGCATGCC
Downstream 100 bases:
>100_bases GCCGCGCCGGTGCGGCGGCGGTTTTTGTAAAAAGGGCTGGAAAAGCCCTTGACACACGAATGTGCCTTCGACATAATCTC GCTTCTCCGCTGCACGACGA
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPFNFPIFLTWVRIVLIPLVVGVFYLPDTVMGGAHRNLAAAAIFILAALTDWFDGFLARKWNQTSSFGAFLDPVADKLMV TAALLILVQISRVDAAIALVIVGREIAISALREWMAQIGASKSVAVNQLGKFKTACQMVAIPMLLFYGPLPLGVVTIDTR VWGEWLMYLAAVLTIWSMLYYMKLAWPQIRERGGA
Sequences:
>Translated_195_residues MPFNFPIFLTWVRIVLIPLVVGVFYLPDTVMGGAHRNLAAAAIFILAALTDWFDGFLARKWNQTSSFGAFLDPVADKLMV TAALLILVQISRVDAAIALVIVGREIAISALREWMAQIGASKSVAVNQLGKFKTACQMVAIPMLLFYGPLPLGVVTIDTR VWGEWLMYLAAVLTIWSMLYYMKLAWPQIRERGGA >Mature_194_residues PFNFPIFLTWVRIVLIPLVVGVFYLPDTVMGGAHRNLAAAAIFILAALTDWFDGFLARKWNQTSSFGAFLDPVADKLMVT AALLILVQISRVDAAIALVIVGREIAISALREWMAQIGASKSVAVNQLGKFKTACQMVAIPMLLFYGPLPLGVVTIDTRV WGEWLMYLAAVLTIWSMLYYMKLAWPQIRERGGA
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=191, Percent_Identity=48.6910994764398, Blast_Score=154, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21592; Mature: 21461
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNFPIFLTWVRIVLIPLVVGVFYLPDTVMGGAHRNLAAAAIFILAALTDWFDGFLARK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WNQTSSFGAFLDPVADKLMVTAALLILVQISRVDAAIALVIVGREIAISALREWMAQIGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKSVAVNQLGKFKTACQMVAIPMLLFYGPLPLGVVTIDTRVWGEWLMYLAAVLTIWSMLY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH YMKLAWPQIRERGGA HHHHHHHHHHHCCCC >Mature Secondary Structure PFNFPIFLTWVRIVLIPLVVGVFYLPDTVMGGAHRNLAAAAIFILAALTDWFDGFLARK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WNQTSSFGAFLDPVADKLMVTAALLILVQISRVDAAIALVIVGREIAISALREWMAQIGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKSVAVNQLGKFKTACQMVAIPMLLFYGPLPLGVVTIDTRVWGEWLMYLAAVLTIWSMLY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH YMKLAWPQIRERGGA HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]