Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689148

Identifier: 116689148

GI number: 116689148

Start: 1236901

End: 1237365

Strand: Direct

Name: 116689148

Synonym: Bcen2424_1126

Alternate gene names: NA

Gene position: 1236901-1237365 (Clockwise)

Preceding gene: 116689147

Following gene: 116689149

Centisome position: 35.5

GC content: 75.05

Gene sequence:

>465_bases
TTGACGAGTCCATTCGATGCTCCGGCCGGGCGTCCGCAGCGCTTTGCGTTGCGGGCCTCGGCCGTGTCGTATCTCGTGCT
GGCCGCGTTCGTCGCGTCGGCTGCCGCCTCGGCGTACCTGTTCTGGGCGCCGCGCGCGGGCGCTGCCGCCGGCGCAGGCG
TGTCGGCTGCGACGGCGGCACTGCTGGCAGTATGGGCGGCGCGCGCTTGCGCCCGCCGGCTACCGGCCGAGTTGCGGATC
GATGCCTTCGGGGAGATTGCGGCGTTTGGCCGCACCGGGCGGTTGCTGGCCCGTGGCCGCGTGACGGGCCATGCGCACTG
GAGCAGCCTGCTGCTGGTGCTGTCGGTCGGGCAGGGTGCCCGGCGGGCCCGGCCGCTGCTGATTCCGGCCGACGCGCTCG
ACGCCGCGTCGTTCAGCGCGCTGTCGGTGCTGGCGAGATCGGCCGGGGCGGCGGGGCGGGCATGA

Upstream 100 bases:

>100_bases
CCGCGCGTGACATGAAGATCGACGTAGCCGTGAAGAACAACTTCGGCTTCGGCGGCACCAACGGCACGCTGGTGTTCAAG
CGCGTCTGACGTCGAATCGC

Downstream 100 bases:

>100_bases
CGGTGGTGCGGTTACCGACCGTAACCAGCGGCCGGCGCCGGAACGCTACAATAACGCTCCGCGTTGCATCCCTAGTTAAC
GGATTTGTCAGGTGAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTSPFDAPAGRPQRFALRASAVSYLVLAAFVASAAASAYLFWAPRAGAAAGAGVSAATAALLAVWAARACARRLPAELRI
DAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGARRARPLLIPADALDAASFSALSVLARSAGAAGRA

Sequences:

>Translated_154_residues
MTSPFDAPAGRPQRFALRASAVSYLVLAAFVASAAASAYLFWAPRAGAAAGAGVSAATAALLAVWAARACARRLPAELRI
DAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGARRARPLLIPADALDAASFSALSVLARSAGAAGRA
>Mature_153_residues
TSPFDAPAGRPQRFALRASAVSYLVLAAFVASAAASAYLFWAPRAGAAAGAGVSAATAALLAVWAARACARRLPAELRID
AFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGARRARPLLIPADALDAASFSALSVLARSAGAAGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15610; Mature: 15479

Theoretical pI: Translated: 12.35; Mature: 12.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPFDAPAGRPQRFALRASAVSYLVLAAFVASAAASAYLFWAPRAGAAAGAGVSAATAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHH
LLAVWAARACARRLPAELRIDAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGA
HHHHHHHHHHHHHCCHHEECCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCC
RRARPLLIPADALDAASFSALSVLARSAGAAGRA
HHCCCEEEECCHHCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSPFDAPAGRPQRFALRASAVSYLVLAAFVASAAASAYLFWAPRAGAAAGAGVSAATAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHH
LLAVWAARACARRLPAELRIDAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGA
HHHHHHHHHHHHHCCHHEECCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCC
RRARPLLIPADALDAASFSALSVLARSAGAAGRA
HHCCCEEEECCHHCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA