| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689116
Identifier: 116689116
GI number: 116689116
Start: 1206136
End: 1206537
Strand: Direct
Name: 116689116
Synonym: Bcen2424_1093
Alternate gene names: NA
Gene position: 1206136-1206537 (Clockwise)
Preceding gene: 116689112
Following gene: 116689123
Centisome position: 34.62
GC content: 71.14
Gene sequence:
>402_bases ATGTCCAAGATTCGTACGATGCTGATCGGTGCCGCGCTGACGGCCTTCGCTACTTCGGCCGCATTCGCCCAGACGGGCAC GACGGCGCAAGGCGCGGCCGGTGCCGGCGTGCAGGCGCAGACGCCGGCCGCTGGTGCCGGTGCAGGCGTGCAGGGTGGTG CCGGCGCGAACGCGTCGGGCAATGCGGCGGGCGGTGCGACCGATGCGGTCGGCGCGGCAGCCGATGGCGCGAAGGATACG ACGTCGTCGGCCGTCCATTCGACCAAGAAGCATACGAAGCATGCGGCGAAGTCGGCCAAGAGCCATGCGGGTTCGGCCAA GGCGAAGGCCGACGACGCGACCGAAGGCGGCGCATCGGTCGGCGCGCAGGGCGGTGCATCGGCCCAGGGCGCCACGCAGT AA
Upstream 100 bases:
>100_bases GGCCGCGGGTCTTCTGTCGTACCTGCTGCGTGTTGCGGCGGGGAACGCGACGGACCGCATCGCTGCGGACCGGACGCACA ACTTCTTGAGGAGAATTGCC
Downstream 100 bases:
>100_bases GCGGTGCCCGGCGCTTGTCGCGACGCCTGTTTTCGGACGGCGCGTCGCGACGGGCGATCATCCGGCGGCCCGGTTCGCTT CGCGCGAACCGGGCCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSKIRTMLIGAALTAFATSAAFAQTGTTAQGAAGAGVQAQTPAAGAGAGVQGGAGANASGNAAGGATDAVGAAADGAKDT TSSAVHSTKKHTKHAAKSAKSHAGSAKAKADDATEGGASVGAQGGASAQGATQ
Sequences:
>Translated_133_residues MSKIRTMLIGAALTAFATSAAFAQTGTTAQGAAGAGVQAQTPAAGAGAGVQGGAGANASGNAAGGATDAVGAAADGAKDT TSSAVHSTKKHTKHAAKSAKSHAGSAKAKADDATEGGASVGAQGGASAQGATQ >Mature_132_residues SKIRTMLIGAALTAFATSAAFAQTGTTAQGAAGAGVQAQTPAAGAGAGVQGGAGANASGNAAGGATDAVGAAADGAKDTT SSAVHSTKKHTKHAAKSAKSHAGSAKAKADDATEGGASVGAQGGASAQGATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12036; Mature: 11905
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIRTMLIGAALTAFATSAAFAQTGTTAQGAAGAGVQAQTPAAGAGAGVQGGAGANASG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NAAGGATDAVGAAADGAKDTTSSAVHSTKKHTKHAAKSAKSHAGSAKAKADDATEGGASV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GAQGGASAQGATQ CCCCCCCCCCCCC >Mature Secondary Structure SKIRTMLIGAALTAFATSAAFAQTGTTAQGAAGAGVQAQTPAAGAGAGVQGGAGANASG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NAAGGATDAVGAAADGAKDTTSSAVHSTKKHTKHAAKSAKSHAGSAKAKADDATEGGASV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GAQGGASAQGATQ CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA