| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689109
Identifier: 116689109
GI number: 116689109
Start: 1198089
End: 1200656
Strand: Reverse
Name: 116689109
Synonym: Bcen2424_1086
Alternate gene names: NA
Gene position: 1200656-1198089 (Counterclockwise)
Preceding gene: 116689110
Following gene: 116689106
Centisome position: 34.46
GC content: 73.4
Gene sequence:
>2568_bases ATGACGCTCACCATGGCCCCCCTGTTCACGCTCAAGCGCACCGCCCGCTACACGCTGCTCGCGTTCGTCGCGCTGGCGGC GCTGCCGCCCGCCTTCGCGCAATCGGCCGATGCACCGGCGAATATGGCCGCGGCACGGCAACCGGGCGGCGATCCGCCCG GGCGCGTCGCGCGGCTCAATTACCTGTCGGGCGCCGTGACGACCGAACCGGCCGGCACCGACGCGTGGTCGTATGCGGCG GTGAACCGGCCGCTGACGACCGGCGACCAGCTGTGGAACGATGCCGGCGCGCGCTCGGAACTGCACATCGGCTCGACGGC GGTGCGGCTCGGCGAATCGACCAGCCTGTCGGTGCTGAACCTCGACGACACGACGACGCAATTGAAGGTGGGGCTCGGCA CCGTGTCGACGCACGTGCGCGATCTGCCGGCCGGCGGATCGTACGAAATCGACACGCTGAACCTCGCGCTCGGCATCACG GGCCCCGGCGACTATCGCGTCGATGTCGCGCCGAACGGCGCGAGCACGACGGTGACGGTGCGCAGCGGCAGCGCGACCGT ATACGGCAGCAACGGCCAGTATCCGCTGTCGCCCGGCCAGCAGGTCGTGTTCACCGGCACCGACCTGCAGGTCGCGCAGC AATCGCCCGCACCGGGCCCCGACGCGCTCGACCAGTGGGCCGCCAGCCGCGACGCGGCCGAAGCGCGCTCGGTGTCGGCC CGCTACGTGTCCCGCGACATTCCCGGCTACCAGGATCTCGATGCGAACGGCACGTGGCGCGAAACCCCGAATTACGGCGC GGTATGGGTGCCGAACGACACGCCGGCCGACTGGGCGCCGTACCACGACGGCCACTGGATCTGGCAGGCGCCGTGGGGCT GGACCTGGGTCGACGACGCCCCGTGGGGCTTCGCGCCGTATCACTACGGCCGCTGGGCGTACGTGGACGACAGCTGGGCA TGGGTACCCGGCCCGATGGCAGTGAGCCAGCCGCCCGTCTATGCGCCGGCGCTCGTCGCGTTCGTGGGCGGCGGGGGCGG CGGCGGTTCCGACTGGAATGTGGCGCTGACGGTCGGCGGCGTCGCGGCGGCCGGCTGCGCATGGTTCGCCCTCGGGCCGG GCGAGCCGTGGCATCCCGGCTGGGGCGGCTGGAGCCCGCACTACTACGACCGCGTCAACCGCAACATCGTGGTGAACAAC GTCAACGTGAACAAGACCGTGAACGTGACGAACATCACCAATATCACCAACATCAACAAGACGTACGTGAACTTCCGCGC GCCGCACGCGATCACGGCCGTGCCGGCCGCCGCGTTCGTGCACGGCCAGCCGGTCGCGCACTTCTCGCAGCACGTCGATC CGCAGCAATGGCGCAACGCGCACGTCACCCCGGGCACACCCGGCATCGCGCCGGTGCGCCAGAGCTTCACCGGCGGGCTG CGCAATGCCAGCTACCGTCCGCCGGCGGCGCTCGCGCAACACCCGTACGTCGCGACGCGCAATCCGGCCGTGCCGCCTGC GTATCGCGATCAGGCCGCCGCCCACCTCGCGCAGCAAGGCGGGCGCGTGCCGGGTGCCGGCGCGCCCGTCGTGAAGACGA ACGTGCCGGCCGACTATACGGCTCGCCCGGTCCGCGTGCCGGGCAAGCCGGGCGGCGGCGCCTGGGCGATGCACAACGTG CAGCTCGTGAATCCGCACGGCCCCGTCGTCCAGCCGGCCCGCGCGCCGCGCGAGGGCCAGCCGGCCGGCGTGCAGGCCGG ACGGCCGGGCGCACCGATGCCGGGCATGCCGAATGTCGCGCGGCCGGCGAACGGCGAAACGCCCAACGCACCGCGTTTCG ACAACGGCGGCCCGCCGCGGGCGCCCGGCAACCCGATGCCGCATCAGGCATTCGCGGCCGGCAACGGCGTTCCGCATCCG CCCGAAGCGAACAACGCCCCGCGGGGGACCGGTAACGCGCACGCAGCCAACACGCCGTCGCCCGCGTGGATGCAGCCTCA CACGCCGATGGAGCGTCAGCGCGCGGCTCCCCCCACCGCGCTGCACGCGGCAGGACAGAATGCGCTGCCGCCCGTGCGCA GCGCCGCGGTGCCGCATCCCGACGGCGTGCCGGCACCGCAGGGCGTACCGCCCGGCGGCCGCAACGAAGCGCCGCGCACG CTGCCGCAACCGCAGTCCGACCATACCGCGCAGATTCCGCAACCGCGTCCGCGCCCCGATTTCCCGACGCCGGCGCGCCA TGCGCAGCCGCAACCGGAACGGGCCGCCCCCGCGCCGCAACCGCGTCCGGACTTCGCTCAACCCGCGCCGCATCGCGAAG TCGCGCCGCCGCGCGTGAACGAGTACCGTCCACCGGCACCAGCCGTCCATGACGTGCCGCGGCCGCAGCCGCAGGCGCCG CGTATGGAGCCGCGACCGCAGCCGCAGCCCGCCCCCCGCATGGAGCCGCGCCCGTCGATGCCGGCCCCCCGGATGGAACC ACGGCCGCAGCCGGCGCCGCACGTCGAAGCGCCGCATCCGGGCAATCCGCCGCCGCAGGGCGGCCACGAGGAACGGCATC GCCAGTAA
Upstream 100 bases:
>100_bases ACATCGCGTGCCATTCGATTTACAAAACACCGTGCCTTGAAACAGGCCAAGCGGATATCGTGAACTGGACGGCACGAATC GACGCGCCGCGATCACAACG
Downstream 100 bases:
>100_bases GTGCAGCAAACCTGAAACAAAAAGGCTCGACCGGCGAATACCGGTCGAGCCTTTTTACAGGATGCGAAGCGATGCAGCCG CGCGGCCCCGGCCGTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Prolin-Rich Exported Protein; Proline-Rich Transmembrane Protein; Chromosome Segregation ATPase; Proline-Rich Exported Protein; Chromosome Segregation ATPases; Secreted Protein
Number of amino acids: Translated: 855; Mature: 854
Protein sequence:
>855_residues MTLTMAPLFTLKRTARYTLLAFVALAALPPAFAQSADAPANMAAARQPGGDPPGRVARLNYLSGAVTTEPAGTDAWSYAA VNRPLTTGDQLWNDAGARSELHIGSTAVRLGESTSLSVLNLDDTTTQLKVGLGTVSTHVRDLPAGGSYEIDTLNLALGIT GPGDYRVDVAPNGASTTVTVRSGSATVYGSNGQYPLSPGQQVVFTGTDLQVAQQSPAPGPDALDQWAASRDAAEARSVSA RYVSRDIPGYQDLDANGTWRETPNYGAVWVPNDTPADWAPYHDGHWIWQAPWGWTWVDDAPWGFAPYHYGRWAYVDDSWA WVPGPMAVSQPPVYAPALVAFVGGGGGGGSDWNVALTVGGVAAAGCAWFALGPGEPWHPGWGGWSPHYYDRVNRNIVVNN VNVNKTVNVTNITNITNINKTYVNFRAPHAITAVPAAAFVHGQPVAHFSQHVDPQQWRNAHVTPGTPGIAPVRQSFTGGL RNASYRPPAALAQHPYVATRNPAVPPAYRDQAAAHLAQQGGRVPGAGAPVVKTNVPADYTARPVRVPGKPGGGAWAMHNV QLVNPHGPVVQPARAPREGQPAGVQAGRPGAPMPGMPNVARPANGETPNAPRFDNGGPPRAPGNPMPHQAFAAGNGVPHP PEANNAPRGTGNAHAANTPSPAWMQPHTPMERQRAAPPTALHAAGQNALPPVRSAAVPHPDGVPAPQGVPPGGRNEAPRT LPQPQSDHTAQIPQPRPRPDFPTPARHAQPQPERAAPAPQPRPDFAQPAPHREVAPPRVNEYRPPAPAVHDVPRPQPQAP RMEPRPQPQPAPRMEPRPSMPAPRMEPRPQPAPHVEAPHPGNPPPQGGHEERHRQ
Sequences:
>Translated_855_residues MTLTMAPLFTLKRTARYTLLAFVALAALPPAFAQSADAPANMAAARQPGGDPPGRVARLNYLSGAVTTEPAGTDAWSYAA VNRPLTTGDQLWNDAGARSELHIGSTAVRLGESTSLSVLNLDDTTTQLKVGLGTVSTHVRDLPAGGSYEIDTLNLALGIT GPGDYRVDVAPNGASTTVTVRSGSATVYGSNGQYPLSPGQQVVFTGTDLQVAQQSPAPGPDALDQWAASRDAAEARSVSA RYVSRDIPGYQDLDANGTWRETPNYGAVWVPNDTPADWAPYHDGHWIWQAPWGWTWVDDAPWGFAPYHYGRWAYVDDSWA WVPGPMAVSQPPVYAPALVAFVGGGGGGGSDWNVALTVGGVAAAGCAWFALGPGEPWHPGWGGWSPHYYDRVNRNIVVNN VNVNKTVNVTNITNITNINKTYVNFRAPHAITAVPAAAFVHGQPVAHFSQHVDPQQWRNAHVTPGTPGIAPVRQSFTGGL RNASYRPPAALAQHPYVATRNPAVPPAYRDQAAAHLAQQGGRVPGAGAPVVKTNVPADYTARPVRVPGKPGGGAWAMHNV QLVNPHGPVVQPARAPREGQPAGVQAGRPGAPMPGMPNVARPANGETPNAPRFDNGGPPRAPGNPMPHQAFAAGNGVPHP PEANNAPRGTGNAHAANTPSPAWMQPHTPMERQRAAPPTALHAAGQNALPPVRSAAVPHPDGVPAPQGVPPGGRNEAPRT LPQPQSDHTAQIPQPRPRPDFPTPARHAQPQPERAAPAPQPRPDFAQPAPHREVAPPRVNEYRPPAPAVHDVPRPQPQAP RMEPRPQPQPAPRMEPRPSMPAPRMEPRPQPAPHVEAPHPGNPPPQGGHEERHRQ >Mature_854_residues TLTMAPLFTLKRTARYTLLAFVALAALPPAFAQSADAPANMAAARQPGGDPPGRVARLNYLSGAVTTEPAGTDAWSYAAV NRPLTTGDQLWNDAGARSELHIGSTAVRLGESTSLSVLNLDDTTTQLKVGLGTVSTHVRDLPAGGSYEIDTLNLALGITG PGDYRVDVAPNGASTTVTVRSGSATVYGSNGQYPLSPGQQVVFTGTDLQVAQQSPAPGPDALDQWAASRDAAEARSVSAR YVSRDIPGYQDLDANGTWRETPNYGAVWVPNDTPADWAPYHDGHWIWQAPWGWTWVDDAPWGFAPYHYGRWAYVDDSWAW VPGPMAVSQPPVYAPALVAFVGGGGGGGSDWNVALTVGGVAAAGCAWFALGPGEPWHPGWGGWSPHYYDRVNRNIVVNNV NVNKTVNVTNITNITNINKTYVNFRAPHAITAVPAAAFVHGQPVAHFSQHVDPQQWRNAHVTPGTPGIAPVRQSFTGGLR NASYRPPAALAQHPYVATRNPAVPPAYRDQAAAHLAQQGGRVPGAGAPVVKTNVPADYTARPVRVPGKPGGGAWAMHNVQ LVNPHGPVVQPARAPREGQPAGVQAGRPGAPMPGMPNVARPANGETPNAPRFDNGGPPRAPGNPMPHQAFAAGNGVPHPP EANNAPRGTGNAHAANTPSPAWMQPHTPMERQRAAPPTALHAAGQNALPPVRSAAVPHPDGVPAPQGVPPGGRNEAPRTL PQPQSDHTAQIPQPRPRPDFPTPARHAQPQPERAAPAPQPRPDFAQPAPHREVAPPRVNEYRPPAPAVHDVPRPQPQAPR MEPRPQPQPAPRMEPRPSMPAPRMEPRPQPAPHVEAPHPGNPPPQGGHEERHRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90464; Mature: 90333
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTMAPLFTLKRTARYTLLAFVALAALPPAFAQSADAPANMAAARQPGGDPPGRVARLN CEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEE YLSGAVTTEPAGTDAWSYAAVNRPLTTGDQLWNDAGARSELHIGSTAVRLGESTSLSVLN ECCCCEECCCCCCCCEEHHHCCCCCCCHHHHHHCCCCCCEEECCHHHEECCCCCCEEEEE LDDTTTQLKVGLGTVSTHVRDLPAGGSYEIDTLNLALGITGPGDYRVDVAPNGASTTVTV CCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCEEEEE RSGSATVYGSNGQYPLSPGQQVVFTGTDLQVAQQSPAPGPDALDQWAASRDAAEARSVSA ECCCEEEECCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RYVSRDIPGYQDLDANGTWRETPNYGAVWVPNDTPADWAPYHDGHWIWQAPWGWTWVDDA HHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCEECCCC PWGFAPYHYGRWAYVDDSWAWVPGPMAVSQPPVYAPALVAFVGGGGGGGSDWNVALTVGG CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCCEEEEEECC VAAAGCAWFALGPGEPWHPGWGGWSPHYYDRVNRNIVVNNVNVNKTVNVTNITNITNINK HHHCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCE TYVNFRAPHAITAVPAAAFVHGQPVAHFSQHVDPQQWRNAHVTPGTPGIAPVRQSFTGGL EEEEEECCCEEECCCHHHHHCCCCHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCC RNASYRPPAALAQHPYVATRNPAVPPAYRDQAAAHLAQQGGRVPGAGAPVVKTNVPADYT CCCCCCCCHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC ARPVRVPGKPGGGAWAMHNVQLVNPHGPVVQPARAPREGQPAGVQAGRPGAPMPGMPNVA CCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPANGETPNAPRFDNGGPPRAPGNPMPHQAFAAGNGVPHPPEANNAPRGTGNAHAANTPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAWMQPHTPMERQRAAPPTALHAAGQNALPPVRSAAVPHPDGVPAPQGVPPGGRNEAPRT CCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC LPQPQSDHTAQIPQPRPRPDFPTPARHAQPQPERAAPAPQPRPDFAQPAPHREVAPPRVN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC EYRPPAPAVHDVPRPQPQAPRMEPRPQPQPAPRMEPRPSMPAPRMEPRPQPAPHVEAPHP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNPPPQGGHEERHRQ CCCCCCCCCHHHCCC >Mature Secondary Structure TLTMAPLFTLKRTARYTLLAFVALAALPPAFAQSADAPANMAAARQPGGDPPGRVARLN EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEE YLSGAVTTEPAGTDAWSYAAVNRPLTTGDQLWNDAGARSELHIGSTAVRLGESTSLSVLN ECCCCEECCCCCCCCEEHHHCCCCCCCHHHHHHCCCCCCEEECCHHHEECCCCCCEEEEE LDDTTTQLKVGLGTVSTHVRDLPAGGSYEIDTLNLALGITGPGDYRVDVAPNGASTTVTV CCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCEEEEE RSGSATVYGSNGQYPLSPGQQVVFTGTDLQVAQQSPAPGPDALDQWAASRDAAEARSVSA ECCCEEEECCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RYVSRDIPGYQDLDANGTWRETPNYGAVWVPNDTPADWAPYHDGHWIWQAPWGWTWVDDA HHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCEECCCC PWGFAPYHYGRWAYVDDSWAWVPGPMAVSQPPVYAPALVAFVGGGGGGGSDWNVALTVGG CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCCEEEEEECC VAAAGCAWFALGPGEPWHPGWGGWSPHYYDRVNRNIVVNNVNVNKTVNVTNITNITNINK HHHCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCE TYVNFRAPHAITAVPAAAFVHGQPVAHFSQHVDPQQWRNAHVTPGTPGIAPVRQSFTGGL EEEEEECCCEEECCCHHHHHCCCCHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCC RNASYRPPAALAQHPYVATRNPAVPPAYRDQAAAHLAQQGGRVPGAGAPVVKTNVPADYT CCCCCCCCHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC ARPVRVPGKPGGGAWAMHNVQLVNPHGPVVQPARAPREGQPAGVQAGRPGAPMPGMPNVA CCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPANGETPNAPRFDNGGPPRAPGNPMPHQAFAAGNGVPHPPEANNAPRGTGNAHAANTPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAWMQPHTPMERQRAAPPTALHAAGQNALPPVRSAAVPHPDGVPAPQGVPPGGRNEAPRT CCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC LPQPQSDHTAQIPQPRPRPDFPTPARHAQPQPERAAPAPQPRPDFAQPAPHREVAPPRVN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC EYRPPAPAVHDVPRPQPQAPRMEPRPQPQPAPRMEPRPSMPAPRMEPRPQPAPHVEAPHP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNPPPQGGHEERHRQ CCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA