| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is aroA [H]
Identifier: 116689068
GI number: 116689068
Start: 1159222
End: 1160526
Strand: Direct
Name: aroA [H]
Synonym: Bcen2424_1045
Alternate gene names: 116689068
Gene position: 1159222-1160526 (Clockwise)
Preceding gene: 116689067
Following gene: 116689069
Centisome position: 33.27
GC content: 68.12
Gene sequence:
>1305_bases ATGGACTACCTCGATCTCGGCCCGTACTCCAGCGCATCGGGCACCGTGCGCCTGCCCGGCTCGAAGAGCATTTCGAACCG CGTGCTGCTGCTCGCGGCGCTCGCCGAAGGCGAAACGACGATCACCAACCTGCTCGACTCCGACGACACGCGTGTGATGC TCGACGCACTCGGCAAGCTCGGCGTGAAGCTCGCGCGCGATGGCGACACCTGTGTCGTCACCGGCACGCGCGGCGCGTTC ACCGCGAAGACGGCCGACCTGTTCCTCGGCAACGCGGGCACGGCCGTGCGGCCGCTGACCGCCGCACTCGCGGTGAACGG CGGCGACTACCGCGTGCACGGCGTGCCGCGCATGCACGAACGGCCGATCGGCGATCTCGTCGATGGCCTGCGCCAGATCG GCGCGCAGATCGACTACGAGCTGAGCGAAGGTTACCCGCCGCTGCGGATCAAGCCCGCGACGATTTCGGTCGATGCGCCG ATCCGCGTGCGCGGTGACGTGTCGAGCCAGTTCCTCACCGCGCTCCTGATGACGCTGCCGCTCGTGAAGGCGAAGGATGG CCAGGCCGTCGTCGAAGTCGACGGCGAGCTGATCTCGAAACCGTACGTCGACATCACGATCCGGCTGATGGCGCGCTTCG GCGTGACCGTCGAGCGCGACGGCTGGCAGCGCTTCGTGGTGCCGGCCGGCGTCCGCTACCGCTCGCCGGGGCGAATCATG GTCGAGGGCGACGCGTCGTCCGCGTCGTATTTCCTCGCGGCCGGCGCGCTCGGCGGCGGCCCGCTGCGGGTCGAAGGCGT GGGGCGGGCGAGTATCCAGGGTGACGTCGGTTTCGCGAATGCGCTGATGCAGATGGGCGCGAACGTGACGATGGGCGACG ACTGGATCGACGTACGCGGCATCGGCCACGATCACGGCAAGCTCGAGCCGATCGACATGGACTTCAACCTGATTCCCGAC GCGGCGATGACCATCGCGGTCGCGGCGCTGTTCGCGAACGGCACGAGCACGCTGCGCAACATCGCGAGCTGGCGCGTGAA GGAGACCGACCGCATCGCCGCGATGGCGACCGAGTTGCGCAAGGTCGGCGCGATTGTCGAGGAAGGCCCCGACTATCTCG TCGTCACGCCGCCGGAAAAGCTCACGCCGAACGCGGCGATCGATACGTACGACGATCACCGGATGGCGATGTGCTTCTCG CTCGTCAGCCTGGGCGGCGTGCCCGTGCGGATCAACGATCCGAAGTGCGTCGGCAAGACGTTCCCCGACTATTTCGACCG CTTCGCCGCGCTCGCCAAGGCCTGA
Upstream 100 bases:
>100_bases GAAGCCGTATTCACGCGCTCGCGCGCCGCACGCAAGGCATGGCAGGAACGCGGCGGCACGCCCGCTGCCGAACCGGTCAA GAAATAACAGGACGATTCCC
Downstream 100 bases:
>100_bases CCCGACTGTTCCGATGAAATCGACCCGACCCTTTCACCCGACTCCCGTCATCACGATCGACGGCCCGACCGCTTCCGGCA AGGGCACCGTCGCGGCGCTC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MDYLDLGPYSSASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALGKLGVKLARDGDTCVVTGTRGAF TAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHERPIGDLVDGLRQIGAQIDYELSEGYPPLRIKPATISVDAP IRVRGDVSSQFLTALLMTLPLVKAKDGQAVVEVDGELISKPYVDITIRLMARFGVTVERDGWQRFVVPAGVRYRSPGRIM VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIDVRGIGHDHGKLEPIDMDFNLIPD AAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELRKVGAIVEEGPDYLVVTPPEKLTPNAAIDTYDDHRMAMCFS LVSLGGVPVRINDPKCVGKTFPDYFDRFAALAKA
Sequences:
>Translated_434_residues MDYLDLGPYSSASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALGKLGVKLARDGDTCVVTGTRGAF TAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHERPIGDLVDGLRQIGAQIDYELSEGYPPLRIKPATISVDAP IRVRGDVSSQFLTALLMTLPLVKAKDGQAVVEVDGELISKPYVDITIRLMARFGVTVERDGWQRFVVPAGVRYRSPGRIM VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIDVRGIGHDHGKLEPIDMDFNLIPD AAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELRKVGAIVEEGPDYLVVTPPEKLTPNAAIDTYDDHRMAMCFS LVSLGGVPVRINDPKCVGKTFPDYFDRFAALAKA >Mature_434_residues MDYLDLGPYSSASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALGKLGVKLARDGDTCVVTGTRGAF TAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHERPIGDLVDGLRQIGAQIDYELSEGYPPLRIKPATISVDAP IRVRGDVSSQFLTALLMTLPLVKAKDGQAVVEVDGELISKPYVDITIRLMARFGVTVERDGWQRFVVPAGVRYRSPGRIM VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIDVRGIGHDHGKLEPIDMDFNLIPD AAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELRKVGAIVEEGPDYLVVTPPEKLTPNAAIDTYDDHRMAMCFS LVSLGGVPVRINDPKCVGKTFPDYFDRFAALAKA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=437, Percent_Identity=58.1235697940503, Blast_Score=464, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6320332, Length=450, Percent_Identity=39.1111111111111, Blast_Score=246, Evalue=5e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 46250; Mature: 46250
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLDLGPYSSASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALGKL CCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCEEHHHHHHHC GVKLARDGDTCVVTGTRGAFTAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHE CEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHC RPIGDLVDGLRQIGAQIDYELSEGYPPLRIKPATISVDAPIRVRGDVSSQFLTALLMTLP CCHHHHHHHHHHHCCCCCEEHHCCCCCCEEECCEEEECCCEEEECCCHHHHHHHHHHHCC LVKAKDGQAVVEVDGELISKPYVDITIRLMARFGVTVERDGWQRFVVPAGVRYRSPGRIM CEECCCCCEEEEECCHHHCCCCCEEEEEEHHHHCCEEECCCCEEEEEECCCEECCCCEEE VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIDVRG EECCCCCCEEEEEECCCCCCCEEEEECCCEEECCCCHHHHHHHHCCCCEEECCCEEEEEE IGHDHGKLEPIDMDFNLIPDAAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELR CCCCCCCCEEECCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH KVGAIVEEGPDYLVVTPPEKLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKT HHHHHHHCCCCEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCC FPDYFDRFAALAKA CHHHHHHHHHHHCC >Mature Secondary Structure MDYLDLGPYSSASGTVRLPGSKSISNRVLLLAALAEGETTITNLLDSDDTRVMLDALGKL CCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCEEHHHHHHHC GVKLARDGDTCVVTGTRGAFTAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHE CEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHC RPIGDLVDGLRQIGAQIDYELSEGYPPLRIKPATISVDAPIRVRGDVSSQFLTALLMTLP CCHHHHHHHHHHHCCCCCEEHHCCCCCCEEECCEEEECCCEEEECCCHHHHHHHHHHHCC LVKAKDGQAVVEVDGELISKPYVDITIRLMARFGVTVERDGWQRFVVPAGVRYRSPGRIM CEECCCCCEEEEECCHHHCCCCCEEEEEEHHHHCCEEECCCCEEEEEECCCEECCCCEEE VEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIDVRG EECCCCCCEEEEEECCCCCCCEEEEECCCEEECCCCHHHHHHHHCCCCEEECCCEEEEEE IGHDHGKLEPIDMDFNLIPDAAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELR CCCCCCCCEEECCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH KVGAIVEEGPDYLVVTPPEKLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKT HHHHHHHCCCCEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCC FPDYFDRFAALAKA CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA