| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yhjG [H]
Identifier: 116689052
GI number: 116689052
Start: 1139726
End: 1141372
Strand: Direct
Name: yhjG [H]
Synonym: Bcen2424_1029
Alternate gene names: 116689052
Gene position: 1139726-1141372 (Clockwise)
Preceding gene: 116689050
Following gene: 116689057
Centisome position: 32.71
GC content: 70.37
Gene sequence:
>1647_bases ATGGCTGACACACTGCCTGATATCCCGCCCGTGCTGATCGTCGGCGCGGGGCCCACCGGTCTCGCCGCGGCGATGAGCCT CGCACGGGCTCGCGTGCCGGTGCGCATCATCGATCGTCTCGTCGCGCCCGCGCCGTTTTCGCGTGCGATCGGCATCCAGG CGCGCACGCTCGAACTGCTGGAGCAGCATCGCGCGGTCGAGCCGTTTCTCGCGCTCGGTCATCGCGCGCATGCGGCCGAG CTGCACGCCGACGGCCGCGTGATCGCACGGCTCGATTTCGATCCGCTGCGAACGCGCTATCCGTATCTGATGTTTCTCGA CCAGAGCGTTACCGAGCGGCTGCTCGCCGAGCACCTGGCCGGCATGGGCGTGAGCGTCGAACGCGGGACGGCGCTGACCG GCTGCGATGCGGGCGGCACGTCGCTCGACGTGACGCTGCGCCGCGCCGACGGCCGCGACGAATCGTTCAGCCCGTCGTAC CTGATTGCCGCCGACGGCGCGCACAGCACGGTGAGGCATCTGCTCGGCCTGGGCTTTGCCGGGCATGCGTTCGAACAGAC TTTCCTGCTGGCCGATTTCGCGGCGATACCCGACTGGCCGGACGAAGAGATCCACCTGTTCACGACACCCGCCGGCATCG CGGGCCTGTTTCCGATGGGAGGCGGCCGTTACCGGCTCGTCGCGGACCGGCCTCCGCGCAGCGACGCGTCGCCCGACGCG CCGGCGCCGTCGCTCGACGAATGCGACGCGATCATCCGCGCGCGCGTCGGCGCATCGATCTCGCCGAGCGATCTCGCGTG GTCGTCCTATTTTCACCTGCACAGCCGGATGGTCGACCGGCTCCGTCACGGCCGCGTGTTCTTCGCGGGCGACGCGGCGC ACGTTCACAGCCCGGCCGGTGCGCAGGGCATGAACACCGGCATCCAGGAAGCGTTCAACCTGGGCTGGAAGCTCGCCCGC GTCCTCGGCGCAGGCGCGCCCGAGCGATTGCTCGACACGTATCACGCGGAGCGCCACCCGATCGAGCGGGACGTATTGCG GCAGACCGGTTTCGTCACGCAGATCGTCGAAGCCGAGCGCGGCGCGATGAAGCTGCTGCGTGATCACGTCGTGCCGCTGC TGGCGTCGTTCGGGCCGATGCGCGACGCGGTCAGGCGCACGGTCAGCGAGCTCGGCGTGCAATACCGGAAGAGTCCGCTC ACGCTCGAGCGCGTGCTCGATGGCGGCCCACGGGCAGGCGAGCGGGCGCCCGACGCACTCGTACACGTGCTCGACGGGCC GCTCGGCCGCGCGCCCGGCACGGCGCGGCTATACGATATTCACGATCCGGCCTGCTTCACGCTGTTGCTGCTGGAAGAGC CGGTGGATACCGACGCCGGCGAGGTGCCGCCGATCCCGGCCGATGCGCAGGCGCTCGTGCAGGGGCTCGAACGGATCATG CCGGAAGCGGTGCGCGTTTGGCGCGTCGCCGATGCCGAAGGCGATGGTACGGCCGGGCTCGCGCAGGAATACGGCCGCTC GCGCCCGTCGTTCTATCTGCTGCGGCCCGACGGCTACGTTGCCGCGCGCGGGCGCACGGCGACCGACGCGAACGCGCTGC TGCGCCACTGCGAAACCTGGTTCGCGGGCGTGTCGGTATCCGCGTAG
Upstream 100 bases:
>100_bases TCCCACACCGCGCGGCGGGGCCGCGTATCGGCCGGTCGGCATATGGCCCCGTGACGCGGAGCGGCGTAGACTTGCAGAGT CGCGTGTCATCGAGGTTCTC
Downstream 100 bases:
>100_bases CCGCGCGCGCGGTCAGGCGGGCGCCGCGGCAGGGACGAGCGACGCGCGATGCGCGGCGATCGCATCGCGCACGATCGGCG TCGCGCGTTGCCCGGCTTCG
Product: monooxygenase, FAD-binding
Products: H2O; 3-(2,3-dihydroxyphenyl)propionate; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MADTLPDIPPVLIVGAGPTGLAAAMSLARARVPVRIIDRLVAPAPFSRAIGIQARTLELLEQHRAVEPFLALGHRAHAAE LHADGRVIARLDFDPLRTRYPYLMFLDQSVTERLLAEHLAGMGVSVERGTALTGCDAGGTSLDVTLRRADGRDESFSPSY LIAADGAHSTVRHLLGLGFAGHAFEQTFLLADFAAIPDWPDEEIHLFTTPAGIAGLFPMGGGRYRLVADRPPRSDASPDA PAPSLDECDAIIRARVGASISPSDLAWSSYFHLHSRMVDRLRHGRVFFAGDAAHVHSPAGAQGMNTGIQEAFNLGWKLAR VLGAGAPERLLDTYHAERHPIERDVLRQTGFVTQIVEAERGAMKLLRDHVVPLLASFGPMRDAVRRTVSELGVQYRKSPL TLERVLDGGPRAGERAPDALVHVLDGPLGRAPGTARLYDIHDPACFTLLLLEEPVDTDAGEVPPIPADAQALVQGLERIM PEAVRVWRVADAEGDGTAGLAQEYGRSRPSFYLLRPDGYVAARGRTATDANALLRHCETWFAGVSVSA
Sequences:
>Translated_548_residues MADTLPDIPPVLIVGAGPTGLAAAMSLARARVPVRIIDRLVAPAPFSRAIGIQARTLELLEQHRAVEPFLALGHRAHAAE LHADGRVIARLDFDPLRTRYPYLMFLDQSVTERLLAEHLAGMGVSVERGTALTGCDAGGTSLDVTLRRADGRDESFSPSY LIAADGAHSTVRHLLGLGFAGHAFEQTFLLADFAAIPDWPDEEIHLFTTPAGIAGLFPMGGGRYRLVADRPPRSDASPDA PAPSLDECDAIIRARVGASISPSDLAWSSYFHLHSRMVDRLRHGRVFFAGDAAHVHSPAGAQGMNTGIQEAFNLGWKLAR VLGAGAPERLLDTYHAERHPIERDVLRQTGFVTQIVEAERGAMKLLRDHVVPLLASFGPMRDAVRRTVSELGVQYRKSPL TLERVLDGGPRAGERAPDALVHVLDGPLGRAPGTARLYDIHDPACFTLLLLEEPVDTDAGEVPPIPADAQALVQGLERIM PEAVRVWRVADAEGDGTAGLAQEYGRSRPSFYLLRPDGYVAARGRTATDANALLRHCETWFAGVSVSA >Mature_547_residues ADTLPDIPPVLIVGAGPTGLAAAMSLARARVPVRIIDRLVAPAPFSRAIGIQARTLELLEQHRAVEPFLALGHRAHAAEL HADGRVIARLDFDPLRTRYPYLMFLDQSVTERLLAEHLAGMGVSVERGTALTGCDAGGTSLDVTLRRADGRDESFSPSYL IAADGAHSTVRHLLGLGFAGHAFEQTFLLADFAAIPDWPDEEIHLFTTPAGIAGLFPMGGGRYRLVADRPPRSDASPDAP APSLDECDAIIRARVGASISPSDLAWSSYFHLHSRMVDRLRHGRVFFAGDAAHVHSPAGAQGMNTGIQEAFNLGWKLARV LGAGAPERLLDTYHAERHPIERDVLRQTGFVTQIVEAERGAMKLLRDHVVPLLASFGPMRDAVRRTVSELGVQYRKSPLT LERVLDGGPRAGERAPDALVHVLDGPLGRAPGTARLYDIHDPACFTLLLLEEPVDTDAGEVPPIPADAQALVQGLERIMP EAVRVWRVADAEGDGTAGLAQEYGRSRPSFYLLRPDGYVAARGRTATDANALLRHCETWFAGVSVSA
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786543, Length=404, Percent_Identity=27.2277227722772, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: 1.14.13.- [C]
Molecular weight: Translated: 59096; Mature: 58965
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTLPDIPPVLIVGAGPTGLAAAMSLARARVPVRIIDRLVAPAPFSRAIGIQARTLELL CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCHHHHHHHH EQHRAVEPFLALGHRAHAAELHADGRVIARLDFDPLRTRYPYLMFLDQSVTERLLAEHLA HHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCHHHHCCCEEEEECHHHHHHHHHHHHH GMGVSVERGTALTGCDAGGTSLDVTLRRADGRDESFSPSYLIAADGAHSTVRHLLGLGFA CCCCEECCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC GHAFEQTFLLADFAAIPDWPDEEIHLFTTPAGIAGLFPMGGGRYRLVADRPPRSDASPDA CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCCCCCCCCC PAPSLDECDAIIRARVGASISPSDLAWSSYFHLHSRMVDRLRHGRVFFAGDAAHVHSPAG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCC AQGMNTGIQEAFNLGWKLARVLGAGAPERLLDTYHAERHPIERDVLRQTGFVTQIVEAER CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHH GAMKLLRDHVVPLLASFGPMRDAVRRTVSELGVQYRKSPLTLERVLDGGPRAGERAPDAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHH VHVLDGPLGRAPGTARLYDIHDPACFTLLLLEEPVDTDAGEVPPIPADAQALVQGLERIM HHHHCCCCCCCCCCCEEEECCCCHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH PEAVRVWRVADAEGDGTAGLAQEYGRSRPSFYLLRPDGYVAARGRTATDANALLRHCETW HHHHHHHEEECCCCCCCCHHHHHHCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHH FAGVSVSA HCCCCCCC >Mature Secondary Structure ADTLPDIPPVLIVGAGPTGLAAAMSLARARVPVRIIDRLVAPAPFSRAIGIQARTLELL CCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCHHHHHHHH EQHRAVEPFLALGHRAHAAELHADGRVIARLDFDPLRTRYPYLMFLDQSVTERLLAEHLA HHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCHHHHCCCEEEEECHHHHHHHHHHHHH GMGVSVERGTALTGCDAGGTSLDVTLRRADGRDESFSPSYLIAADGAHSTVRHLLGLGFA CCCCEECCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC GHAFEQTFLLADFAAIPDWPDEEIHLFTTPAGIAGLFPMGGGRYRLVADRPPRSDASPDA CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCCCCCCCCC PAPSLDECDAIIRARVGASISPSDLAWSSYFHLHSRMVDRLRHGRVFFAGDAAHVHSPAG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCC AQGMNTGIQEAFNLGWKLARVLGAGAPERLLDTYHAERHPIERDVLRQTGFVTQIVEAER CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHH GAMKLLRDHVVPLLASFGPMRDAVRRTVSELGVQYRKSPLTLERVLDGGPRAGERAPDAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHH VHVLDGPLGRAPGTARLYDIHDPACFTLLLLEEPVDTDAGEVPPIPADAQALVQGLERIM HHHHCCCCCCCCCCCEEEECCCCHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH PEAVRVWRVADAEGDGTAGLAQEYGRSRPSFYLLRPDGYVAARGRTATDANALLRHCETW HHHHHHHEEECCCCCCCCHHHHHHCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHH FAGVSVSA HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-(3-hydroxyphenyl)propionate; NADH; O2 [C]
Specific reaction: 3-(3-hydroxyphenyl)propionate + NADH + O2 = H2O + 3-(2,3-dihydroxyphenyl)propionate + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]