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The map label for this gene is 116689026

Identifier: 116689026

GI number: 116689026

Start: 1110452

End: 1111603

Strand: Reverse

Name: 116689026

Synonym: Bcen2424_1003

Alternate gene names: NA

Gene position: 1111603-1110452 (Counterclockwise)

Preceding gene: 116689027

Following gene: 116689020

Centisome position: 31.91

GC content: 62.76

Gene sequence:

>1152_bases
ATGAAAAAAACCCTGATCGTCACCGCGTTGTCGGGTGTATTCGTTACCGCAGCCCATGCTCAAAGCAGCGTTACGCTGTA
CGGCCTGATCGATGCAGGCATCACCTACACGAACAATCAGGGCGGGCATAGCTCATGGTCGGAGCGCAGCGGCCAGATCA
ACGGCAGCCGCTGGGGCCTGCGCGGCACGGAAGATCTCGGCGGCGGACTGAAAGCCATCTTCGTGTTGGAGAACGGCTTC
AACATCGCCAACGGCACGCTGGGCCAAAATGGCCGCGAGTTCGGCCGCCAGGCGTTCGTCGGCCTGTCGCAAGACCAGTT
TGGCTCCCTCACCCTCGGTCGCCAATACGATAGCGTCGTCGATTACATCGGGCCGCTGTCGCTGACCGGCACGCAATTCG
GCGGCACTCAATTTGCCCACCCGTTCGACAACGACAACCTGAACAATTCGTTCCGGATCAATAACTCGGTCAAATATACG
AGCGTCAATTTCGGCGGCCTGAAGTTCGGCGCGTTGTACGGCTTCTCGAACAGCAACCAGTTCTCGAACAACCGTGCATA
CAGCGCGGGGGTGTCGTACACCTACGCCGGCTTCAACATCGGCGCCGGCTACCTGCAGTTGAACAATGACACCTCGGGGC
TCACGGCAGCTGCGGTCACCAACAGCGCCGGCGCGGTGGCAGGCGACAACACGTTCGTCGGCAAGCGTCAGCGCGTGTTC
GGCGGCGGCCTGAACTACACGTTCGGCCCCGCCACGGCCGGCTTCGTATTCACGCAAACGCGTGTGAACCGGGCGCTCGG
CATCTCCGCGGGCGCCTCGGGCGTGTCGAGCGGCCTGGGTCTCGACGGCACGTTCGCCCGCTTCAACAACTACGAAGTGA
ACGCGCGCTACGCGCTCACGCCGGCCTTGTCGCTGGCCGGGTCGTACACGTACACCGCCGGCTTCCTGGACGGCCGTCAT
CCGGGCTGGAATCAGTTCAACCTGCAGACCGACTATGCGCTGTCCAAGCGGACCGACGTGTATGTGCAAGGCGTGTATCA
GCGAGTCAGCACGGACGGCCTGGGCATCGGCGCCTATGTCAATGGCCTCGGTGGCGCTTCGTCGACCAACAAGCAGATCG
CGGTGACCGCCGGCCTGCGCCATCGCTTCTGA

Upstream 100 bases:

>100_bases
TAAGCGCACCGCCGCTCTGCCGGGCCGGCTACAGCGTCAAGCAAAACACGGCCAGTCCGCCGCAGGTTCGATCGACATCA
TCCTGTTTGGAGACAGATCC

Downstream 100 bases:

>100_bases
GCAACCGGCAACGCCAACGCCAACGCAACGTACACGCGAATAAAAAAGCGCCCCATCGGGGCGCTTTTTCTTGGCTGCGT
CGGACCGATATGCTCAGGCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKKTLIVTALSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGGLKAIFVLENGF
NIANGTLGQNGREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYT
SVNFGGLKFGALYGFSNSNQFSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVF
GGGLNYTFGPATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSYTYTAGFLDGRH
PGWNQFNLQTDYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASSTNKQIAVTAGLRHRF

Sequences:

>Translated_383_residues
MKKTLIVTALSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGGLKAIFVLENGF
NIANGTLGQNGREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYT
SVNFGGLKFGALYGFSNSNQFSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVF
GGGLNYTFGPATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSYTYTAGFLDGRH
PGWNQFNLQTDYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASSTNKQIAVTAGLRHRF
>Mature_383_residues
MKKTLIVTALSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGGLKAIFVLENGF
NIANGTLGQNGREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYT
SVNFGGLKFGALYGFSNSNQFSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVF
GGGLNYTFGPATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSYTYTAGFLDGRH
PGWNQFNLQTDYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASSTNKQIAVTAGLRHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40411; Mature: 40411

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLIVTALSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGL
CCCEEEEEEECCEEEEEECCCCCEEEEEEEECCEEEECCCCCCCCHHHCCCCCCCCCCCC
RGTEDLGGGLKAIFVLENGFNIANGTLGQNGREFGRQAFVGLSQDQFGSLTLGRQYDSVV
CCCHHHCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHH
DYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYTSVNFGGLKFGALYGFSNSNQ
HHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEEEEECCCCCC
FSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVF
CCCCCEEECCCEEEEECEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE
GGGLNYTFGPATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALT
CCCCCCEECCCCCCEEEEHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEC
PALSLAGSYTYTAGFLDGRHPGWNQFNLQTDYALSKRTDVYVQGVYQRVSTDGLGIGAYV
HHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHCCCCCEEEHEE
NGLGGASSTNKQIAVTAGLRHRF
CCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKTLIVTALSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGL
CCCEEEEEEECCEEEEEECCCCCEEEEEEEECCEEEECCCCCCCCHHHCCCCCCCCCCCC
RGTEDLGGGLKAIFVLENGFNIANGTLGQNGREFGRQAFVGLSQDQFGSLTLGRQYDSVV
CCCHHHCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHH
DYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYTSVNFGGLKFGALYGFSNSNQ
HHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEEEEECCCCCC
FSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVF
CCCCCEEECCCEEEEECEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE
GGGLNYTFGPATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALT
CCCCCCEECCCCCCEEEEHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEC
PALSLAGSYTYTAGFLDGRHPGWNQFNLQTDYALSKRTDVYVQGVYQRVSTDGLGIGAYV
HHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHCCCCCEEEHEE
NGLGGASSTNKQIAVTAGLRHRF
CCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]